Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq1319 232 3e-56 >seq1319 Length=24325 Score = 232 bits (256), Expect = 3e-56 Identities = 520/775 (67%), Gaps = 22/775 (3%) Strand=Plus/Plus Query 65729 GGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCC 65788 ||| || ||||| ||||| ||| | | ||||| |||||||| || || || || Sbjct 21697 GGATGTAATTCCTACCGGTTCTCTGGG-CTGGATATTGCTCTGGGTATTGGTGGCCTGCC 21755 Query 65789 GAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCT 65848 | | ||||| ||| | |||||||| || || ||| ||| || || | || ||| || Sbjct 21756 GCGTGGCCGCGTGATTGAAATCTATGGGCCGGAAAGTTCCGGTAAAACCACGCTGGCGCT 21815 Query 65849 CCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCA 65908 || || | || | ||||||||| || |||| | ||||| || ||||| || || Sbjct 21816 GCATGCTATTGCAGAAGCGCAGAAGCGTGGCGGCACCTGCGCCTTTATTGACGCCGAACA 21875 Query 65909 CTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT 65968 | | |||||||| | || |||||| ||| || ||||| | || ||||| || | Sbjct 21876 CGCGCTGGACCCCGGCTATGCCAAGAAGCTGGGCGTGGATGTTGATAACCTGCTGATCAG 21935 Query 65969 TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 66028 ||||| ||| | || || ||||| |||||||| | ||| || || || || | Sbjct 21936 CCAGCCCGACGCCGGAGAACAGGCGCTGGAGATTGCTGATACGCTGGTGCGTTCCGGTG- 21994 Query 66029 GCTGTCCATCGTC--GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66086 | | || || || || || |||||| || ||||| ||||| || || || ||| Sbjct 21995 -CCATTGATGTTCTGGTGGTGGATAGTGTGGCTGCTCTGGTTCCGCGTGCGGAACTGGAA 22053 Query 66087 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66146 ||||| || || ||||| ||||| || ||||| || || || ||| ||||| ||||| Sbjct 22054 GGCGATATGGGTGACAGCCACGTGGGGCTGCATGCCCGGCTGATGAGCCAGGCGCTGCGC 22113 Query 66147 AAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66206 ||||| || || || | || || ||||||| ||| | ||| | || ||| | || Sbjct 22114 AAGCTGACCGGTTCCTTATCACGCTCCAACACCATGATGATCTTTCTGAATCAGATTCGT 22173 Query 66207 GAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTG 66266 ||| || || | || | | |||| || ||||| || |||||||| || ||| Sbjct 22174 CTGAAAATTGGTGTCATGTTCGGCAACCCG---GAAACCACAACCGGCGGCAATGCCTTG 22230 Query 66267 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 66326 | |||||| || || || || | ||| |||| || | | || ||||| || Sbjct 22231 AAGTTCTATGCATCCGTTCGGCTTGATATCCGCCGTGTGGGTTCCATCAAGGACAAGGAC 22290 Query 66327 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66386 |||| ||| || |||| ||||| |||||||| |||||||||||| |||| |||||| | Sbjct 22291 GAGGTTGTGGGTAACCAGACCCGCGTGAAGGTGGTCAAGAACAAGATGGCGCCGCCGTTC 22350 Query 66387 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC---GAACTC 66443 || | | || || | || ||||||| || |||||| | ||||| ||||| Sbjct 22351 CGGCAGGTGGAATTTGACATCATGTACGGTGAAGGCATC---AGCAAGGTCGGGGAACTG 22407 Query 66444 CTCGACCTGGCCGTGTCGCAGGGCC----TGGTGAAGAAGTCGGGCGCCTGGTTC 66494 |||| || | || || |||| ||||| | || || ||||| |||||| Sbjct 22408 ATCGATCTTGGGGT----CAAGGCCGGTGTGGTGGAAAAATCCGGCGCATGGTTC 22458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243630976085820