Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq1655 91.5 5e-14 >seq1655 Length=1316 Score = 91.5 bits (100), Expect = 5e-14 Identities = 215/323 (67%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 40166 TCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGAT 40225 |||| |||| ||||||||| || ||| |||||||| | || || || || Sbjct 466 TCCGAACGTGATGATCTGCGCCACACGGTCCGCCCCGTATTCACGCCGCACATAGGCTAT 525 Query 40226 GACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGC 40283 |||||| | || || || | || ||||||||| || | || ||||||||||| || Sbjct 526 CACCTCGTCTCGCCGGTCCTGACA--GAAGTCGATATCAAAGTCAGGCATGGACACACGT 583 Query 40284 TCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40343 || || ||||| || || ||||| | || | | |||||| || | ||| ||||| Sbjct 584 TCAGGATTCAGAAACCGTTCGAACAGCAGATTGAACGGCAGCGGATCAATGTCCGTGATG 643 Query 40344 CCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACC 40403 | | | ||| |||| ||||| || | || || ||||| || || || | Sbjct 644 GTCAACGCCCATGCGGCCAGAGAACCTGCACCCGACCCACGCCCCGGCCCCACGGGAATA 703 Query 40404 CCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCC 40463 | | | |||| |||| ||||||||||||| |||| | |||||| ||||| ||| Sbjct 704 TCATGCGTCTTCCCCCACTGGATGAAGTCCGCAACGATCATGAAGTAACCGGGGAAGCCC 763 Query 40464 ATCTGGATGATCATGTCGATCTC 40486 |||| | ||| || || | ||| Sbjct 764 ATCTTGGAGATAATATCCAGCTC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163313680949694