Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq1319 196 2e-45 >seq1319 Length=24325 Score = 196 bits (216), Expect = 2e-45 Identities = 458/689 (66%), Gaps = 4/689 (1%) Strand=Plus/Plus Query 67568 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 67627 ||||| ||||| || | | ||||| ||||| || || || || ||| | ||| Sbjct 21704 ATTCCTACCGGTTCTCTGGG-CTGGATATTGCTCTGGGTATTGGTGGCCTGCCGCGTGGC 21762 Query 67628 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 67687 || || | || ||||| || || || ||| || || | ||| || || || || Sbjct 21763 CGCGTGATTGAAATCTATGGGCCGGAAAGTTCCGGTAAAACCACGCTGGCGCTGCATGCT 21822 Query 67688 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 67747 | || | || |||||| || |||| | ||||| || ||||||||||| | || Sbjct 21823 ATTGCAGAAGCGCAGAAGCGTGGCGGCACCTGCGCCTTTATTGACGCCGAACACGCGCTG 21882 Query 67748 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 67807 ||||| | || ||| | ||| || |||||||| || || || || | ||||| Sbjct 21883 GACCCCGGCTATGCCAAGAAGCTGGGCGTGGATGTTGATAACCTGCTGATCAGCCAGCCC 21942 Query 67808 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 67867 ||| | || || ||||| |||||||| | ||| || || || || | || Sbjct 21943 GACGCCGGAGAACAGGCGCTGGAGATTGCTGATACGCTGGTGCGTTCCGGTGCCATTGAT 22002 Query 67868 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 67927 | | || ||||| |||||| || ||||| ||||| ||||| || ||||| || || Sbjct 22003 GTTCTGGTGGTGGATAGTGTGGCTGCTCTGGTTCCGCGTGCGGAACTGGAAGGCGATATG 22062 Query 67928 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 67987 || ||| ||||| || ||||||||||| |||||| ||||| |||||||||||||| Sbjct 22063 GGTGACAGCCACGTGGGGCTGCATGCCCGGCTGATGAGCCAGGCGCTGCGCAAGCTGACC 22122 Query 67988 GGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATC 68047 || | | | || ||||||| | | | | |||||||| | || ||| || Sbjct 22123 GGTTCCTTATCACGCTCCAACACCATGATGATCTTTCTGAATCAGATTCGTCTGAAAATT 22182 Query 68048 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTAC 68107 || | || | | |||| || ||||| ||||| || || || || ||||| Sbjct 22183 GGTGTCATGTTCGGCAACCCG---GAAACCACAACCGGCGGCAATGCCTTGAAGTTCTAT 22239 Query 68108 GCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 68167 || || || || | ||| ||||| | | | || ||||| || |||| ||| Sbjct 22240 GCATCCGTTCGGCTTGATATCCGCCGTGTGGGTTCCATCAAGGACAAGGACGAGGTTGTG 22299 Query 68168 GGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCT 68227 || |||| || ||||||||||| |||||||||||| ||||||| ||| ||| |||| Sbjct 22300 GGTAACCAGACCCGCGTGAAGGTGGTCAAGAACAAGATGGCGCCGCCGTTCCGGCAGGTG 22359 Query 68228 GAGTTTTCCATCGTCTACGGCGAGGGCAT 68256 || ||| |||| | ||||| || ||||| Sbjct 22360 GAATTTGACATCATGTACGGTGAAGGCAT 22388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247432310464464