Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4069 109 4e-18 >seq4069 Length=229605 Score = 109 bits (120), Expect = 4e-18 Identities = 180/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| ||| |||||||||| ||| || || || ||||| ||| | | || Sbjct 169374 ACATCGAAGGTGCCACCACCCAGATCGAAGATGAGCACATTGCGCTCTCCCTTGAGATTC 169315 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || || ||||| || || ||||| ||||| ||||| || ||||| | | ||||| Sbjct 169314 TTGTCCAGTCCATAGGCCAAGGCAGCTGCAGTGGGTTCGTTGATAATCCGGAGGACATTC 169255 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 ||||||||||| || ||||| || ||||| || | || || || ||||| || || Sbjct 169254 AGACCAGCAATGGCACCCGCATCCTTGGTGGCCTGGCGCTGGGAGTCATTAAAGTAAGCG 169195 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || || |||||||| ||||| | || | || | |||||| ||||||| ||| Sbjct 169194 GGCACTGTAATAACCGCATCCTTGACCGTGCTGCCCAGATAAGCTTCAGCTGTTTCCTTC 169135 Query 282515 ATTTTACTTAAAATCATTGA 282534 || ||| | || | ||| || Sbjct 169134 ATCTTAGTCAACACCATGGA 169115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740348933927658