Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq5566 96.9 6e-15 >seq5566 Length=752539 Score = 96.9 bits (106), Expect = 6e-15 Identities = 175/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 183037 CAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAA 183096 ||| | ||| || || | || || || ||||| | ||| | || ||||||||||| ||| Sbjct 126212 CAACTGCAGCTGGTGCGCGAGGGCAAGATGCACGGCTTTCTGCGCATGTACTGGGCCAAA 126153 Query 183097 AAGATACTTGAATGGACAAGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAA 183155 ||||| || || ||||| || |||||| | || | |||| | ||| | |||| Sbjct 126152 AAGATTCTCGAGTGGACCGCCACCCCGGAACAGGCGCTGGAGTATGCGATTCTGT-TGAA 126094 Query 183156 CAATAAGTACGAACTAGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTA 183214 | | |||||| || ||||| ||| ||||| ||||| || || || || |||||||| | Sbjct 126093 CGACAAGTACAGCCTCGACGG-ACGCGATCCCAACGGCTATGTCGGCTGCATGTGGTCCA 126035 Query 183215 TTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATA 183274 || |||| | ||||| | | ||||| || | | ||||| || ||| | | || | Sbjct 126034 TTGGCGGTGTCCACGACATGGGCTGGAAGGAGCGCGCGATATTCGGCAAGGTGCGGTACA 125975 Query 183275 TGAATTATGAG 183285 |||| ||| || Sbjct 125974 TGAACTATCAG 125964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903346459294880