Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq5503 86.0 3e-12 seq5134 86.0 3e-12 >seq5503 Length=77054 Score = 86.0 bits (94), Expect = 3e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 21954 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 22013 |||| | || || ||||| ||||| |||||| ||||||||||||||||||||||||| Sbjct 66497 CTGCCAGCTGTACCAGCGGAGCGCCGACATGGGCCTGGGCGTGCCCTTCAACATCGCCTC 66438 Query 22014 CTACGCGCTGCTGACGCACCTCATGGC 22040 |||||| ||||| || ||| | || || Sbjct 66437 CTACGCCCTGCTCACCCACATGATCGC 66411 >seq5134 Length=897107 Score = 86.0 bits (94), Expect = 3e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 21954 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 22013 |||| | || || ||||| ||||| |||||| ||||||||||||||||||||||||| Sbjct 890751 CTGCCAGCTGTACCAGCGGAGCGCCGACATGGGCCTGGGCGTGCCCTTCAACATCGCCTC 890810 Query 22014 CTACGCGCTGCTGACGCACCTCATGGC 22040 |||||| ||||| || ||| | || || Sbjct 890811 CTACGCCCTGCTCACCCACATGATCGC 890837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236626665517763