Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5134 284 2e-71 >seq5134 Length=897107 Score = 284 bits (314), Expect = 2e-71 Identities = 1201/1873 (64%), Gaps = 28/1873 (1%) Strand=Plus/Plus Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 || ||||||| |||||||| || | | | || || ||||| || || || ||||| Sbjct 539118 TTTTTATCCACTGTGAACTGGATAGCATTTGCAGCCGGCTTTGTGCGCAGGTAATACATC 539177 Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTC 75484 || ||||| ||||| |||| || || || ||| || || || ||| || Sbjct 539178 CCTGTTTTGAGACCAGCTTTCCAGGAATAAAAGTGTATGGACGTCAGCTTTCCGTAATTC 539237 Query 75485 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 75544 || || || | ||||||||| | ||||||||| || || ||||| || || | ||| || Sbjct 539238 GGCTCTGCCACATGAATATTGAACGACTGACTCTGGTCTATGAACGCACCCCGATCTGCG 539297 Query 75545 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 75604 |||||||| || ||| ||| | |||||||| | || ||| | | | || | Sbjct 539298 GCCATTTTAATGGTGGACTTCACCGAGATTTCCCACACGGTCTTGTACAGATCGC-GA-A 539355 Query 75605 TCATCTGG--AA--GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCT 75659 | ||||| || || | | ||||||| ||||| || | || || || |||| Sbjct 539356 CCTTCTGGGGAATGGACTCGATATTTTGGATGGAGCCCCTGCTCGAGATGATCTGGTTCT 539415 Query 75660 TGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAA 75719 | || || || | |||||| | ||| |||| | || || | |||| | ||||| | Sbjct 539416 TCATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTCAGCAAATGATGGTTAACCA 539475 Query 75720 TTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAG 75779 || || || ||||||| || | | ||||||||||| |||| || || || | | Sbjct 539476 CCTGGAACTCGCCAGACAGCACGCGCCTGGTGTAAATATTTGTGGTGTAGGGCTCGAAGG 539535 Query 75780 ATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAAC 75839 |||| ||||| |||| || |||||||| || || || ||||| || || || | | Sbjct 539536 ATTCGTTGTTGCCCATTATCTGAGCAGTAGAGGCCGTGGGCATGGGAGCGACAAGCAGGG 539595 Query 75840 TATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 75898 || | || ||| || || | |||| || || || | || ||| ||||| |||| Sbjct 539596 AGTTCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTTTGCCAGTCCCACAGATTC 539654 Query 75899 GATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTA 75958 | ||| | ||||| | ||||| || |||||||| ||||| | || | Sbjct 539655 GTTGGCTCCTTGTCCCACATGTCGTACTGCAGAATTCCCTTGCTCACGGGGCTGCCCTCG 539714 Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018 || |||||||| | || || | | || |||||||| || || || | || ||||| Sbjct 539715 TAGGTTTCGTAGGGTCCTTCGATCTGCGCCAGTTCGCAGCTGGCTTCCAGGGCGCCGTAG 539774 Query 76019 TAAATTGTTTCGAAAATCTTCTTATT-AAGA-TCTTGCGCTTCAAGACTATCAAAAGGAT 76076 || || || ||||| |||| || || |||| | ||| || | | || ||| | || Sbjct 539775 TAGATGGTCTCGAATATCTGCTGGTTCAAGAGGCCTGC-CTCCTCG-CTTTCATAGGGGA 539832 Query 76077 AATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTC 76136 | | | ||||| | || || || | ||||||||| || || || | ||| | ||| | Sbjct 539833 ATCGCATGAGAATCAGGGCGTCAGCGAATCCCTGAACACCGATGCCCACAGGGCGATGCC 539892 Query 76137 TCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGA 76196 || ||||| | | || ||||| | || ||| | || || || || || || |||| Sbjct 539893 TCAAGTTGGACTTCTTTGCCTCTGGCAGGGGATAAAAGTTGATGTCGATGATCTTGTTGA 539952 Query 76197 GATTTCT-GACAACTACTT--TAACCACGTCCTTTAGTTTGAGAAAATCAAA--TTTTC- 76250 ||||| | | || | ||| || || ||||| || || || ||| | | ||| Sbjct 539953 GATTTTTGGTCACCGTCTTGGTA---ACTTCCTTGAGCTTCTTGAAGTCATACGTCTTCT 540009 Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 | | | ||||||||||| || || || || || | || || ||||| | ||||| || Sbjct 540010 CGGGTGTGACAAACATATTGAGGGCGATCGAGGCCAAGTTGCAGACGGCAATCTCATCAG 540069 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 || || | | || || ||||| | || || |||||||| || || | ||| | Sbjct 540070 GCGAGGAGTACTCGACGATTTCGGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCT 540129 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 | ||||||||||| ||| || | ||||| | || | | || | |||||||| | Sbjct 540130 GCTGGTTGCTCTTCCGGTTGCAGGCATCCTTGAACAGCATGTAGGGGTTCCCAGTTTCCA 540189 Query 76431 TCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTATAGATTTGTATCGC 76489 ||| | || || || | ||| | |||| ||| || | | ||| || Sbjct 540190 CCTGAGCCTCAATGATGGCGAACCAAAGGGACT-GAGCCTTCACCGTTCGGTTGGCACGA 540248 Query 76490 TTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549 |||| || || | || |||| ||| || ||||| ||||| ||||| | | Sbjct 540249 CCCTCTTGCTCGTACTTCTCGTACAACCTTTCGAACTCATCGCCCCACACATCGTGAAGG 540308 Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || |||| | || ||||| | ||||| || |||| ||| || || |||||| Sbjct 540309 CCGGGGCATTTGTGGGGGCACATGAGCGACCAATCGCCATTGGCCTCGACGCGCTTCATA 540368 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCT--TCATTTC 76667 |||||||| |||||||| || || || ||||| |||| | ||||| || || | Sbjct 540369 AAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGG--CGCGGTTCTCCTCCTTGC 540426 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 | || ||||| || || || |||||||| | | || || ||||| || || || || | Sbjct 540427 CGGTGTTCTTCTTCAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAA 540486 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | | || || || || || |||||||| | ||| | || || || Sbjct 540487 TGGCAAAGGCGCCGGGACGCTTGCCGCCGCCCTGATCCACATAACGTGCCACATTGTTGA 540546 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 | || |||| ||| |||| | ||| || || || || || || || |||| | | | Sbjct 540547 AGACCCTCAGCATGGGAACGAGGCCATTGGAGGTGCCGTTCGTGCCGCAAATCGAGGTGC 540606 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 | || || || | | ||| || || || || ||| || ||||| | | Sbjct 540607 CCTTCGCCCGGATGCAGTGGACATTTAGCCCGATGCCGCCAGCCGACTTCGAGATCATGG 540666 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 | || | | || | | | |||||||| || || || ||||| | || || | Sbjct 540667 CGCACTGCTCCACGGACTTGAAAATGCCCTCGATGGAGTCGGCCGTCATGGTGAGGAGGA 540726 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 |||| |||| || | || || | || ||| | ||| || || ||||| | Sbjct 540727 AACACGAGGACAGCTGCGGCCGATTCGTGGCAGCGGCAAAAAGTGTGGGCGACGCATGGG 540786 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087 |||| | || || | ||||| || ||||| | |||| || |||||| | Sbjct 540787 TGAAGTAACGCTCCGACAAGAGATTATACGTTTCCACGGCTGCATCGATATCCTCCCCGT 540846 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | ||||| | || || ||||||| ||| ||||| || || || | |||| ||| Sbjct 540847 GTATTCCGATCGCCACGCGCATCAGCATGTGCTGCGGGCGCTCGGCGATCTTGCCGTTTC 540906 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 77207 | |||| ||| || || ||| | || || || ||||| |||||||| |||||| | Sbjct 540907 TCTTCAGCAAATAGGAACGTTCGAGGGTCTTGAACCCAAAGTAGTTGTACCCAAAGTCGC 540966 Query 77208 TTTCGTAAATAAT 77220 |||||||| || Sbjct 540967 GATCGTAAATTAT 540979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712883309338560