Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_000899.1 Length=45063 Score E Sequences producing significant alignments: (Bits) Value seq3289 80.6 8e-11 >seq3289 Length=20206255 Score = 80.6 bits (88), Expect = 8e-11 Identities = 115/162 (71%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 1058 TAGCCCCTCGTTCGGGCTTGGCCGTAAAGTTTTTTATCGATGTGGGAGCCGGTGTTATCG 1117 ||||||| ||||| || ||||||||||| || ||||||||||| ||||||||| | | Sbjct 8051467 TAGCCCCCCGTTCCGGTCTGGCCGTAAAGAACTTCATCGATGTGGGTGCCGGTGTTGTTG 8051408 Query 1118 ATAGCGATTACCGGGGCATCGTTAGCGTCCTCCTTTTCAATTTTTCGGACCACAATTTCA 1177 | || ||||| || | | | | || || | || ||| ||||||| | || Sbjct 8051407 ACGAGGACTACCGCGGTAACCTGGGTGTTGTCTTGTTTAATCATTCGGACACTGACTTTG 8051348 Query 1178 ACGTCCGTCGGGGCGATCGCATAGCTCAGTTAATTTTGGAGC 1219 | ||| || || |||||||| |||||||| |||| |||| Sbjct 8051347 AGGTCAAGCGCGGAGATCGCATTGCTCAGTTCATTTGCGAGC 8051306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144056850846500