Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq3023 132 4e-26
>seq3023
Length=5802038
Score = 132 bits (146), Expect = 4e-26
Identities = 227/325 (70%), Gaps = 6/325 (2%)
Strand=Plus/Plus
Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511
|||||||| || || | |||||||| |||||| ||||| || |||||||| |||||
Sbjct 3647655 GAATTGTCCTGCCAGCTATATCAACGCAGCGCTGACATGGGTCTCGGTGTTCCCTTCAAC 3647714
Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571
||||| ||||| ||||| || ||| | || || ||||| || | | | || | |||
Sbjct 3647715 ATTGCCTCCTATGCTCTGCTCACTTATTTAATAGCCCATGTGACGGGTCTGAAGCCCGGT 3647774
Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631
|| || ||||||||||||| || || || |||| ||||| ||||||||||| | |
Sbjct 3647775 GAATTCATCCACACCATAGGCGATGCTCACGTTTATCTTAACCATATAGAACCGCTGCAG 3647834
Query 20632 TTACAGTTAACACG-ACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAA 20690
||| ||| ||| | |||| | ||||||| || ||||| || ||||
Sbjct 3647835 CAGCAGATAAAACGTAGCCCCAAGCCTTTTCCCAA-GCTCAACATTAAGCGCCAGGTTAC 3647893
Query 20691 AGATATTAACGATTTTAAAGCT--GATGATTTTGTGTTAGAAGGTTATAATCCCCATAAT 20748
| |||| | || ||| ||| || ||||||| | | || || |||||| ||||
Sbjct 3647894 AAATATCGAGGACTTT--TGCTACGAGGATTTTGAAATTGTTGGCTACAATCCCGATAAG 3647951
Query 20749 TCAATTCCAATGGAAATGTCTGTTT 20773
| ||||||||||| ||| | ||||
Sbjct 3647952 GCGATTCCAATGGAGATGGCCGTTT 3647976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399118175805850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |