Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq466 540 9e-149 seq3134 253 2e-62 seq3378 109 5e-19 seq3289 100 3e-16 seq359 95.1 1e-14 seq3603 86.0 6e-12 >seq466 Length=100518 Score = 540 bits (598), Expect = 9e-149 Identities = 1278/1927 (66%), Gaps = 41/1927 (2%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 ||||| || ||||| ||||| || ||||| || ||||| |||||||||||||||||||| Sbjct 43092 TTGTCTACAGTAAATTGTATAGCATTTGCAGCTGGTTTTGTGCGAAGATAATACATGCCT 43033 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || || ||| ||||| | ||||| || || || || ||||||||||| | ||| Sbjct 43032 GTTTTAAGGCCCGCTTTCCAGGAATAAAAGTGGATTGATGTTAATTTTCCATAGTTTGGC 42973 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | | | | ||| || || ||||| ||||| |||||||| |||| ||| || ||| Sbjct 42972 TCAGCAACATGAATATTAAAAGATTGACTTTGATCAATAAACGCCCCTCTATCAGCTGCC 42913 Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 || || || || | ||| || ||||||||||| ||||||| | || ||| ||| Sbjct 42912 ATTTTAATAGTTGACTTTACCGATATCTCCCATACGGTTTTGTACAAATCCCGGATTTCT 42853 Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTA-TTGTGTATGATCAAATTTTTAAT 22404 ||||| ||||| || | || | || || ||| | || || |||||| || Sbjct 42852 TCGGGTATAGATTCTATATTTTGTATAGATCCTCGGCTTGCG-ATAATTTGATTTTTCAT 42794 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 | ||| | ||||||| | | | || ||||| | | |||| | || || ||||| Sbjct 42793 CTCATCATCCCACAAATCAAGCTCCGTTAAATCACGCAATAAATGAGGATTTACAACTTG 42734 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 |||||| |||||||| || || | | |||||||| || ||| | || ||||| || || Sbjct 42733 AAACTCACCGGACAATACTCGTCTTGTATAAATGTTTGAAGTGTAGGGCTCGAACGACTC 42674 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 |||||| |||| ||| || || || || || || ||||| || || | || | ||||| Sbjct 42673 ATTGTTGCCCATTATTTGCGCAGTGGATGCTGTGGGCATGGGAGCAATTAGCAAAGAGTT 42614 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCGGAC 22642 ||| | ||||||| | || || || || ||| ||||||||| ||||| | Sbjct 42613 TCTAACACCGTGCTGTTTTATGGACCTTTTAAGATGATC--CCAGTCCCAAAGATCTGTT 42556 Query 22643 GGCG-TCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 || | || ||| ||||||||| || || || || || || | || || || Sbjct 42555 GGTGATC----TGTTCCACATATCATACTGTAAAACTCCCTTGCTTACTGGACTTCCAAT 42500 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 || ||||| ||||| |||| || || | ||| || || || ||||| || || || Sbjct 42499 ATAGGTTTCATACGGGCCATCCTTCTTGGACAATTCACAACTAGCTTCCAAAGCTCCATA 42440 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 || ||||| || ||||||| | ||||| | || | ||||||| ||||| | Sbjct 42439 GTAAATAGTTTCAAAGATTTGTTGATTCAAAAGAGATGCTTCTTCGCTTTCATACGGAAA 42380 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 | ||||| | || || || || | || || || || ||||| || || |||| Sbjct 42379 CCTCATCAGAATTAATGCATCTGCAAACCCTTGTACACCAATACCAATAGGGCGGTGCCG 42320 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 | ||| || ||||||||| ||||| ||||| | || ||| ||| || | |||| Sbjct 42319 TAAATTTGATTTTTTTGCCTCTGGCAAGGGATAATAGTTTATATCAATTATTTTATTCAG 42260 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001 |||| |||| |||||||| |||| | ||||||||| |||| Sbjct 42259 GTTTTTGGTAACAATTTTAGTTACATCTTTCAGTTTTTTGAAGTCGTAA------GATTT 42206 Query 23002 TAC------AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTC 23055 | | |||||| |||| | ||| || || || | ||| ||||| || | ||||| Sbjct 42205 TTCGGCCGTCACAAACATGTTTAGGGCTATTGATGCTAAATTACATACAGCTATTTCGTC 42146 Query 23056 TTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATT 23115 | | | ||||| |||||||| || |||| ||| || |||||||| || || | ||| Sbjct 42145 TGGCGCTGAATACTCAACAATTTCCGTGCATAAATTACTGCACTTTATAGTTCCAACATT 42086 Query 23116 GCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTC 23175 || |||||||||| || ||||| || || | |||||||| || || || ||||| Sbjct 42085 TTGTTGATTGCTTTTTCTGTTACACGAGTCTTTAAAAAGCATGTAAGGGGTACCAGTCTC 42026 Query 23176 GACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT 23235 || || || || || || || ||| | || ||||| | |||| ||| | | Sbjct 42025 CACTTGAGATTCAATTATGGCAAACCAAAGAGATTGAGCCTTAACAATTCGATTCTGTCG 41966 Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295 || |||| || || || ||||| |||||||| |||| || || ||| Sbjct 41965 CCCCTCTTTTTCATATTTGACATACAATTTTTCAAATTCTTCACCCCAAACATCTTGCAG 41906 Query 23296 GCCGGGCGATTGCATCGGACACATGA--GAC---TCCACATTGAGTCATTTTCAACGCGT 23350 ||||| ||| |||||||| | ||| ||| | ||| |||||| || Sbjct 41905 ACCGGGGCATTTGTGTGGACACATCAACGACCAATCCTCGTTG-----GCTTCAACCCGC 41851 Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410 ||||||| ||||| || ||||| | || || || || || || || || |||||| Sbjct 41850 TTCATAAAGAGATCAGGAATCCACAAGGCATAAAATAGATCCCGAGCCCGATGTTCCTCT 41791 Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 || || || || ||||| | || ||||| || |||||||| | |||||| ||||| ||| Sbjct 41790 TTTCCAGTATTTTTTTTAAGGTCTAAAAATTCAAACACGTCTGAATGCCAAGGCTCCAGG 41731 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 |||| || || || || ||||| ||| || ||||||||||| || || ||| ||| Sbjct 41730 TAAATAGCGAATGCTCCTGGTCTTTTACCACCACCCTGATCGACATAGCGTGCCACATTG 41671 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590 || | ||||| ||||| || || | || || || | || | ||| | | | Sbjct 41670 TTAAATACTCTAAGCATTGGTACCAAGCCATTTGAAGTACCATTTGTGCCGGAAATAGAG 41611 Query 23591 GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATC 23650 | || |||||||||| ||||| | | ||| |||||||| ||||||| || ||| Sbjct 41610 GTGCCCTTTGCTCGAATACAATGAACATTAAGACCAATGCCTCCTGCCGATTTGGAGATC 41551 Query 23651 ATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACC 23710 || ||||| || | | || | | || || || || ||| | | | | Sbjct 41550 ATTGCGCACTGCTCTACTGTTTTAAATATTCCTTCAATAGAATCCGATGCCATTGTTAAA 41491 Query 23711 AAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 | ||||| || || | ||| || ||| || || || | || || || || Sbjct 41490 AGAAAACATGATGATAATTGGGGACGGTTT----GTGGCAGCAGCAAAAAGCGTTGGTGA 41435 Query 23767 GGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC 23826 || || ||||| || | | ||| | || ||| || || || || || | |||||| || Sbjct 41434 TGCATGTGTAAAATAACGTTCCGATAGTAAATTATATGTTTCAATCGCAGAATCAATATC 41375 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGAC 23886 || || |||||||| || ||||| ||||| | ||||| || |||| || | | Sbjct 41374 ATCACCATGTATACCAATTGCGACACGCATTAGCATGTGCTGTGGTCGTTCCGCTATTTT 41315 Query 23887 GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTT 23946 ||| |||||||| | || |||||| || | | || ||||||||||| || | ||| Sbjct 41314 GCCATTAATTTTAAGCAAATATGATCGCTCAAGTGTCTTAAATCCAAAGTAATTATATCC 41255 Query 23947 AAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTT 24006 ||| |||||||| | | ||| || || ||||| || | | ||| || | ||||| Sbjct 41254 AAAATCACGATCATAAATTATTGCAGAGTTCAAGCGATCTGAATTATTTGCAACAATGTT 41195 Query 24007 GTAATGA 24013 ||||||| Sbjct 41194 GTAATGA 41188 >seq3134 Length=2474545 Score = 253 bits (280), Expect = 2e-62 Identities = 559/834 (67%), Gaps = 22/834 (3%) Strand=Plus/Plus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| || ||||| || ||||| || || ||||| || |||||||||||||||| || | Sbjct 573367 AGGCCGAGGCATCATTCTGGACTGTGGAGGAAGTGGATCTGTCTAAGGATCTGACTGACT 573426 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 ||| ||| | ||| ||| | |||| ||| ||| || |||| ||||| |||| Sbjct 573427 GGGCACGCCTAACAGACAACGAGCGTCATTTCATTTCACATGTTCTGGCCTTTTTTGCCG 573486 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 | |||||||| ||||||||||||||| ||||||| | ||| || ||||| || | | Sbjct 573487 CCTCCGATGGCATTGTTAACGAGAATCTGGTCGAGCGTTTTAGCCAGGAAGTTCAGATTA 573546 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 | ||||| | ||||| || || ||||| | ||||| || || || || || ||||||| Sbjct 573547 CAGAGGCTCGTTGCTTCTATGGCTTTCAGATAGCCATGGAGAATGTCCACTCGGAAATGT 573606 Query 57829 ATTCGCTACTCATCG----ATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTC 57884 | | || || | ||| |||| || || | || || | || || Sbjct 573607 ACAGCGTCCTGATTGACACATATATACGCGATCCGCATCAGCGTGA----TTATCTATTT 573662 Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA 57944 || || || ||||||||||| || | |||||| || ||| | | ||||| Sbjct 573663 AATGCAATTGAAACAATGCCGGCAGTTAAGCGGAAGGCCGACTGGGCGCTTTCTTGGAT- 573721 Query 57945 AAAAGCGCCA---CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001 | | | | | || | || | ||| | | ||||| || || || || || || Sbjct 573722 --ATCCTCTAAGGCAGCTAACTTTGGGGAGCGCATCATCGCATTTGCTGCTGTTGAGGGC 573779 Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061 || |||||| ||||||||||| | || |||||| ||||||| || ||||| |||||| Sbjct 573780 ATCTTCTTTAGCGGCAGCTTTGCTTCTATCTTTTGGCTGAAGAAGCGTGGCCTTATGCCC 573839 Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121 ||||| || || ||||| |||| || ||||||||||| || ||| || ||||| Sbjct 573840 GGCCTCACTTTCTCGAACGAACTGATCTCCCGCGACGAGGGACTGCATTGCGACTTTGCT 573899 Query 58122 TGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATC 58181 ||| |||| | || | || | || | || |||||| | || || ||| Sbjct 573900 GTCCTGATGTTCCAGCATTTGGTGCAGCGTCCCTGCAGAGAGCGCATCATTGAGATCATC 573959 Query 58182 ACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC 58241 |||| || || | || ||| | |||||| | || || || || ||||| || || Sbjct 573960 TCCGATGCTGTTACCATTGAACAGGAGTTTCTTACTGACGCACTGCCGGTCAATTTGATC 574019 Query 58242 GGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTC 58301 || ||||| | | ||||| | || ||||||||||| ||||| | || || | Sbjct 574020 GGCATGAATTGCGCACTTATGTCCGAATATATTGAGTTTGTGGCCGATCGTCTGCTGGTT 574079 Query 58302 GAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATCT 58357 |||| |||| | || || |||||||| || ||||||||| || ||| | | Sbjct 574080 GAAC---TTGG-GGTCGGCAAACTGTACAACACAAAGAATCCGTTTACATTCATGGAAAT 574135 Query 58358 GATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCA 58411 ||| ||| | || ||||| || || || || || |||||||| |||||||||| Sbjct 574136 GATTTCGTTGGACGGCAAAACCAATTTCTTTGAGAAAAAAGTGGGCGAATATCA 574189 >seq3378 Length=5191987 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || |||||| | || || || || || Sbjct 4216909 CATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCATC 4216968 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | || | || || | || ||||||||| ||| | || || || || Sbjct 4216969 CGATACCATTGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 4217028 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||| | || ||||||||||| |||||||| || | | | || || ||| || | Sbjct 4217029 GCAGCGTTTGATCTTCGCTGGCAAGCAGTTGGAGGA-TGGACGCACCTTGTCCGACTACA 4217087 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || ||||| ||||||||||| || Sbjct 4217088 ACATCCAGAAGGAGTCGACCCTTCATCTGGTTCT 4217121 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || |||||| | || || || || || Sbjct 4217593 CATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCATC 4217652 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | || | || || | || ||||||||| ||| | || || || || Sbjct 4217653 CGATACCATTGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 4217712 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||| | || ||||||||||| |||||||| || | | | || || ||| || | Sbjct 4217713 GCAGCGTTTGATCTTCGCTGGCAAGCAGTTGGAGGA-TGGACGCACCTTGTCCGACTACA 4217771 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || ||||| ||||||||||| || Sbjct 4217772 ACATCCAGAAGGAGTCGACCCTTCATCTGGTTCT 4217805 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || |||||| | || || || || || Sbjct 4217137 CATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACTATCACCTTGGAGGTGGAGCCATC 4217196 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | || | || || | || ||||||||| || | || || || || Sbjct 4217197 CGATACCATTGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCA 4217256 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||| | || ||||||||||| |||||||| || | | | || || ||| || | Sbjct 4217257 GCAGCGTTTGATCTTCGCTGGCAAGCAGTTGGAGGA-TGGACGCACCTTGTCCGACTACA 4217315 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || ||||| ||||||||||| || Sbjct 4217316 ACATCCAGAAGGAGTCGACCCTTCATCTGGTTCT 4217349 >seq3289 Length=20206255 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| ||||| || || || || || || ||||| | || || |||||||| Sbjct 14369794 ATGCAAATTTTTGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 14369735 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || ||| | || |||||| ||||| | || || || ||| Sbjct 14369734 GATACCATCGAGAATGTTAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAG 14369675 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| |||| ||||||||||| ||||||||||| Sbjct 14369674 CAGCGTTTAATTTTCGCTGGCAAGCAGTTGGAAGA 14369640 >seq359 Length=456481 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 31179 GAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCG 31238 ||||| |||||| ||||| || |||||||| ||| |||| || || || |||||| | | Sbjct 65881 GAATT--ATCAAA-ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACCATCACCCTGG 65937 Query 31239 ACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCG 31298 | || || || ||||| | |||| | || || | || |||||||| || Sbjct 65938 AGGTGGAGCCTTCCGATACGATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAA 65997 Query 31299 TGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTA 31358 | || || |||||||||||||| || ||||| ||||| || ||||||| | ||| Sbjct 65998 TCCCTCCAGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACTC 66057 Query 31359 TGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCG 31418 | || || ||||| || || || ||||| || || |||| || | ||| | || | Sbjct 66058 TCTCTGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGTCTGCGTGGTG 66117 Query 31419 GTA 31421 ||| Sbjct 66118 GTA 66120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| || || || || || | || || || || ||| Sbjct 66576 ATGCAGATCTTCGTGAAGACCCTGACGGGAAAGACCATTACTCTGGAGGTGGAGCCTTCC 66635 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || |||||||| ||| | || || |||||| Sbjct 66636 GATACGATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 66695 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| || ||||||| | ||| | || || || Sbjct 66696 CAGCGTCTGATCTTTGCCGGCAAGCAACTGGAAGATGGTCGCACTCTCTCTGACTACAAT 66755 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || |||| ||| | ||| | || |||| Sbjct 66756 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTTCGTCTGCGTGGTGGTA 66804 >seq3603 Length=2672878 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||| || || || || || || ||||| || |||||| | || || || || Sbjct 316128 AAAATGCAAATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGCCC 316187 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | ||| ||||| ||||| | || || || Sbjct 316188 TCTGACACCATCGAGAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGAT 316247 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || || || ||||| ||| |||| || || | || || Sbjct 316248 CAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCGGACTAC 316307 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||| || |||||| | || |||| || | ||| | || |||| Sbjct 316308 AACATTCAAAAGGAGTCGACTTTGCACTTGGTGCTGCGTCTGCGTGGTGGTA 316359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445691009757600