Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq3289 98.7 7e-16
seq359 84.2 2e-11
>seq3289
Length=20206255
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||| | || || ||||| || || ||||| || || | | | |||||
Sbjct 14369586 ACCAAATGCAAAGTAGACTCTTTCTGGATATTGTAGTCAGAAAGGGTGCGACCATCTTCC 14369645
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
|| || ||||||||| | || ||||| || || || |||||||||||||||||
Sbjct 14369646 AACTGCTTGCCAGCGAAAATTAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGG 14369705
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| || ||| | || |||||||| ||| || || | || ||||| |||
Sbjct 14369706 ATCTTGGCTTTAACATTCTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTA 14369765
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||||||||||||||||||
Sbjct 14369766 CCCGTGAGGGTTTTTACAAAAATTTGCAT 14369794
>seq359
Length=456481
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAA--TTCTCGCGTCTT 15212
|| || || ||||| || || || || |||||||||| || | || | | | ||||
Sbjct 66556 ACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAAT--CTGACAACGTGCGTCCATCTT 66499
Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272
| | ||| ||||| || | |||| ||| || ||||| || ||||| || |||||
Sbjct 66498 CCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCCT 66439
Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332
||| ||| ||| || | || |||||||| ||| || || || | |||||||| |
Sbjct 66438 GAATCTTGGCCTTCACGTTCTCAATGGTATCACTAGGCTCCACCTCCAGAGTAATGGTCT 66379
Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
| || ||||| || || || || || ||||||
Sbjct 66378 TTCCCGTCAGGGTCTTCACGAAGATCTGCATA 66347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362119477781730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |