Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq3191 84.2 2e-11 >seq3191 Length=20611582 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 69531 AATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAG 69590 ||||| || ||| | ||||||| ||| ||| || || | || || |||| || || Sbjct 10505882 AATGGATACGTGCTGTTCTTTTTCCGTGAACTGTCCATGGAATTCATGAACTTTGGCAAA 10505941 Query 69591 ACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTAC 69650 | | || || | || | |||||||||||| || |||| || || ||| | || Sbjct 10505942 GCGGTCTACTCACGCGTGGGTCGTGTCTGCAAGAACGATCGTGGTGGTCCATACA---AC 10505998 Query 69651 TCGGATAAA---TGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAA 69707 | |||| |||||||| || | ||| | ||||| || || |||||||||||||| Sbjct 10505999 CATGGTAAAAGCTGGACGTCGTTCCTTAAGGCGCGACTCAACTGCTCGGTGCCCGGCGAG 10506058 Query 69708 TTCCCCTTTTACTTTGACGAA 69728 || || ||||||||||| ||| Sbjct 10506059 TTTCCATTTTACTTTGATGAA 10506079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408175881972080