Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq3191 84.2 2e-11
>seq3191
Length=20611582
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 69531 AATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAG 69590
||||| || ||| | ||||||| ||| ||| || || | || || |||| || ||
Sbjct 10505882 AATGGATACGTGCTGTTCTTTTTCCGTGAACTGTCCATGGAATTCATGAACTTTGGCAAA 10505941
Query 69591 ACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTAC 69650
| | || || | || | |||||||||||| || |||| || || ||| | ||
Sbjct 10505942 GCGGTCTACTCACGCGTGGGTCGTGTCTGCAAGAACGATCGTGGTGGTCCATACA---AC 10505998
Query 69651 TCGGATAAA---TGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAA 69707
| |||| |||||||| || | ||| | ||||| || || ||||||||||||||
Sbjct 10505999 CATGGTAAAAGCTGGACGTCGTTCCTTAAGGCGCGACTCAACTGCTCGGTGCCCGGCGAG 10506058
Query 69708 TTCCCCTTTTACTTTGACGAA 69728
|| || ||||||||||| |||
Sbjct 10506059 TTTCCATTTTACTTTGATGAA 10506079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408175881972080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |