Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3023 156 5e-33 >seq3023 Length=5802038 Score = 156 bits (172), Expect = 5e-33 Identities = 312/449 (69%), Gaps = 14/449 (3%) Strand=Plus/Plus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||| ||||| || || |||| ||| ||||| || ||||| || | | || ||||| Sbjct 628861 AACCAGTGCCGATGCCCTCGGCGCCATTCACCAGTACCATCGGTATAATGGGAATATACC 628920 Query 175806 AGTCTGGTTCAATCGCAC-GCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTC 175864 | ||| ||||| || | | ||||||||| || ||| | |||| ||| |||||| | Sbjct 628921 AAATTGGCTCAAT-GCGCTGACCATCATCGACCTGATACTGCAGCAGGGGATCATCCAAC 628979 Query 175865 GGATCAAAGATTTTACGAGCATCCTTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 175920 |||| | |||| ||| | | || || | |||||| || || | || | | Sbjct 628980 GGATGATAGATGAGACGTGTTAGC--GGCGACATCAATGTGAAAATATAACGAGCGCTCG 629037 Query 175921 AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATT 175980 || ||| |||||||| ||||||| || || || ||||| | ||||| | | ||| Sbjct 629038 C-ACA-ATCCTTGCCACCAGTGAGACGTGTACCGAACTGACCGCGCGGCTCCAACAAATT 629095 Query 175981 GATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGA 176039 ||||||||||||||||| | | | | ||||| || ||||| || ||| || ||||| | Sbjct 629096 GATATTGTTTGAGCCCACAAAATTCTGTGCCAAATTCACAATGGTCATCTGC-AGGGACA 629154 Query 176040 CTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCA 176099 || |||||||| ||||| ||| | || ||||| | ||| ||| || ||||| |||| Sbjct 629155 TCTCGCCGTGATGATAGGCTGACATTTCAGCCACCGAACCCGACAATTGGGCCACTTTCA 629214 Query 176100 TCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGA 176159 |||| ||| ||| | |||||||| | |||||||||| | ||| ||||| | Sbjct 629215 CCTCACGCTTATCGTTACGCTTGAAGCACGTAAACATGACCTTGCGCTGACCGGGCTTAA 629274 Query 176160 GGCCGTCGGCCATGTGTGCG-ATGGAACG 176187 |||| || ||| | || | |||||||| Sbjct 629275 GGCCATCCACCA-GACTGGGTATGGAACG 629302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613403440594800