Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3383 86.0 7e-12 >seq3383 Length=19223366 Score = 86.0 bits (94), Expect = 7e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 ||||||||||||| ||||| || ||||| || | || || ||||| || || | Sbjct 1059504 ATGGTGGTCAGGTGTATCTAGACGGAGCCAACATGAACGCCCAGGTGGGTCTGTGTCGGC 1059445 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 || | || ||||| || || | ||||| || | || || || ||||| ||||||| Sbjct 1059444 CAGGCGACTATGGCAGCGACGTGTCCCATCTGAATCTGCACAAGACTTTCTGCATTCCAC 1059385 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||| |||||||||||||| | || || || ||||| Sbjct 1059384 ATGGCGGTGGAGGTCCTGGTATGGGCCCAATCGGTGT 1059348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579114840635200