Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq3134 89.7 6e-13
>seq3134
Length=2474545
Score = 89.7 bits (98), Expect = 6e-13
Identities = 173/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 37445 TATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTG 37504
|||||| || ||||| || | || |||||||| ||||| | ||| || || ||||||||
Sbjct 573632 TATATATGTGTCAATCAGGACGCTGTACATTTCCGAGTGGACATTCTCCATGGCTATCTG 573573
Query 37505 AAAACCATAAAAACACCTAGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTA 37563
||| ||||| || || | ||| || | |||| ||||| || | ||| | || | |
Sbjct 573572 AAAGCCATAGAAGCAACGAGCCTCTG-TAATCTGAACTTCCTGGCTAAAACGCTCGACCA 573514
Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623
|| || ||||| || ||||| || ||||| || || ||||||| | || ||||
Sbjct 573513 GATTCTCGTTAACAATGCCATCGGAGGCGGCAAAAAAGGCCAGAACATGTGAAATGAAAT 573454
Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCAT 37683
| | || | | || || | ||| ||| | | ||| || || | ||| ||||| |
Sbjct 573453 GACGCTCGTTGTCTGTTAGGCGTGCCCAGTCAGTCAGATCCTTAGACAGATCCACTTCCT 573394
Query 37684 CAACGGTCCAAAA 37696
| || ||||| ||
Sbjct 573393 CCACAGTCCAGAA 573381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592216624421200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |