Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3383 100 3e-16
>seq3383
Length=19223366
Score = 100 bits (110), Expect = 3e-16
Identities = 166/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
||||| || || || | |||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 1059348 ACACCGATTGGGCCCATACCAGGACCTCCACCGCCATGTGGAATGCAGAAAGTCTTGTGC 1059407
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| ||| ||||| | || || |||||||| | ||| ||||| ||||| ||
Sbjct 1059408 AGATTCAGATGGGACACGTCGCTGCCATAGTCGCCTGGCCGACACAGACCCACCTGGGCG 1059467
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || || || || ||||| ||||||||||||| | || || | | || |
Sbjct 1059468 TTCATGTTGGCTCCGTCTAGATACACCTGACCACCATGCTTGTGCACCAATGTGCAGA-- 1059525
Query 138363 TGTCTG---ATGTTTGTTTCAAATAC-ACCATGAGTCGATGGATATGTAATCAT 138412
|||| | ||||| |||||| || ||||| || || ||||| ||||||||
Sbjct 1059526 TGTCCGCAACTGTTT-CTTCAAAAACTCCCATG-GTGGAAGGATACGTAATCAT 1059577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578900476895600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |