Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq3289 95.1 2e-14
>seq3289
Length=20206255
Score = 95.1 bits (104), Expect = 2e-14
Identities = 204/303 (67%), Gaps = 4/303 (1%)
Strand=Plus/Plus
Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133
|||||||||| |||||||||||||| || || || ||||||| ||||| ||||
Sbjct 9624742 CACCATAAGGCGAACGTGGATAGAATGGCGTCTGTTCATTCTGTGGGGTCTCCACAACCT 9624801
Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCAT--CTCAAG 48191
| ||||| || || ||||| || ||||||| |||| | ||||| | ||||
Sbjct 9624802 TGCCATACAGCTCGGACGTGGAGGCCTGATAGAATTTAACCGATTTCTCCATGCCACAAG 9624861
Query 48192 CAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTC 48251
|| | || || || | | ||| ||||| | |||||| || | || || ||
Sbjct 9624862 --TGCGTATGGCGTCCAGAATGCGCAGCGTGCCAACGGCATCAACCTCTGCCGTGTATTC 9624919
Query 48252 GGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGG 48311
| || ||||| |||||||| ||||| ||||| | |||||||||||||| |||
Sbjct 9624920 GCTCAAATCAAATGAAACCTTCACATGCGATTGTGCAGCCAGATTATAAATCTCTGTTGG 9624979
Query 48312 TTGAACCTGCTGAATAACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATGCAA 48371
| |||| | ||| | | |||| | | | || || | ||| |||||||||||
Sbjct 9624980 CTTAACCATGTTAATGATCTTCACCAGGCTGCTGCTATCCGTCATGTCGCCATAATGCAA 9625039
Query 48372 TTT 48374
|||
Sbjct 9625040 TTT 9625042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665381848259600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |