Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq359 143 2e-29
seq3378 109 4e-19
seq3289 87.8 1e-12
>seq359
Length=456481
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| || || ||||| || || |||| ||||
Sbjct 66331 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGACCATCT 66272
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| |||||||||||||| || ||||||||| | || | |||||||||||
Sbjct 66271 TCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCT 66212
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | ||| || || | || ||||||
Sbjct 66211 TGGATCTTGGCCTTGACGTTCTCGATCGTATCGGAAGGCTCCACCTCCAGAGTAATGGTC 66152
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| |||||||| || |||||||||||
Sbjct 66151 TTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 66120
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 66103 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCT 66044
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| |||||||||||||| || ||||||||| | || | |||||||||||
Sbjct 66043 TCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCT 65984
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | ||| || || | ||| ||||||
Sbjct 65983 TGGATCTTGGCCTTCACGTTCTCGATCGTATCGGAAGGCTCCACCTCCAGGGTGATGGTC 65924
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| | || ||||| |||||||||||
Sbjct 65923 TTTCCCGTCAAAGTTTTTACGAAGATCTGCAT 65892
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| || || ||||| || || |||| ||||
Sbjct 66787 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGACCATCT 66728
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| ||||| |||||||| || ||||||||| | || | |||||||||||
Sbjct 66727 TCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 66668
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | ||| || || | || ||||||
Sbjct 66667 TGGATCTTGGCCTTGACGTTCTCGATCGTATCGGAAGGCTCCACCTCCAGAGTAATGGTC 66608
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| |||||||| || |||||||||||
Sbjct 66607 TTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 66576
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| |||||||| ||||| || || || | |||| ||||
Sbjct 66559 AGCACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAATCTGACAACGTGCGTCCATCT 66500
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| ||||| |||||||| || ||||||||| | || | |||||||||||
Sbjct 66499 TCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGAGGGATTCCCTCCTTGTCC 66440
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | ||| | | ||| || || | || ||||||
Sbjct 66439 TGAATCTTGGCCTTCACGTTCTCAATGGTATCACTAGGCTCCACCTCCAGAGTAATGGTC 66380
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| |||||||| || |||||||||||
Sbjct 66379 TTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 66348
>seq3378
Length=5191987
Score = 109 bits (120), Expect = 4e-19
Identities = 155/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||| ||||||||||||||| ||||| || | | || ||||
Sbjct 4218034 CAGAACCAAGTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGTACGTCCATC 4217975
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| ||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 4217974 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTC 4217915
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || || | || | ||| || || | ||| |||
Sbjct 4217914 CTGGATCTTGGCCTTAAC--ATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGATG 4217857
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || || | |||||| || ||||||||||||
Sbjct 4217856 GTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATG 4217821
Score = 107 bits (118), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| ||||||||| ||||| ||||| || | | |||| ||||
Sbjct 4217121 AGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCATCC 4217062
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || |||||||||| || ||||| ||| | || | |||||||||||
Sbjct 4217061 TCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 4217002
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 4217001 TGGATCTTGGCCTTAAC--ATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGATGG 4216944
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 4216943 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATG 4216909
Score = 107 bits (118), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| ||||||||| ||||| ||||| || | | |||| ||||
Sbjct 4217805 AGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCATCC 4217746
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || |||||||||| || ||||| ||| | || | |||||||||||
Sbjct 4217745 TCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 4217686
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 4217685 TGGATCTTGGCCTTAAC--ATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGATGG 4217628
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 4217627 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATG 4217593
Score = 105 bits (116), Expect = 4e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| ||||| ||||| || | | || ||||
Sbjct 4216893 AGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCATCC 4216834
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 4216833 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 4216774
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 4216773 TGGATCTTGGCCTTAAC--ATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGATGG 4216716
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || | |||||| || |||||||||||
Sbjct 4216715 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 4216682
Score = 104 bits (114), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| ||||||||| ||||| ||||| || | | |||| ||||
Sbjct 4217349 AGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGTCCATCC 4217290
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || |||||||||| || ||||| ||| | || | |||||||||||
Sbjct 4217289 TCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 4217230
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| || |
Sbjct 4217229 TGGATCTTGGCCTTAAC--ATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGATAG 4217172
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 4217171 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATG 4217137
Score = 104 bits (114), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| ||||| ||||| || | | || ||||
Sbjct 4217577 AGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCATCC 4217518
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 4217517 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCC 4217458
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || || | || | ||| || || | ||| ||||
Sbjct 4217457 TGGATCTTGGCCTTAAC--ATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGATGG 4217400
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| || || | |||||| || ||||||||||||
Sbjct 4217399 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATG 4217365
>seq3289
Length=20206255
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| ||||| || || ||||| || ||| |||| |||| |||| ||||| || |||||
Sbjct 14369603 CTCTTTCTGGATATTGTAGTCAGAAAGGGTGCGACCATCTTCCAACTGCTTGCCAGCGAA 14369662
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| | || ||||| ||| | || | || || ||||| | || || ||| || |
Sbjct 14369663 AATTAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAAC--A 14369720
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | || | ||||| |||| || |||||||| ||||||||||| |||
Sbjct 14369721 TTCTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTT 14369780
Query 34964 ACAAAGATCTGCAT 34977
||||| || |||||
Sbjct 14369781 ACAAAAATTTGCAT 14369794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325639094275070
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