Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3023 100 3e-16
>seq3023
Length=5802038
Score = 100 bits (110), Expect = 3e-16
Identities = 209/312 (67%), Gaps = 6/312 (2%)
Strand=Plus/Minus
Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930
||| ||||||||||| || || |||| | | | ||| | ||| || || |
Sbjct 3647879 AATGTTGAGCTTGGGAAAAGGCTTGGGGCTACGTTTTATCTGCTGCTGCAGCGGTTCTAT 3647820
Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990
||||| || || ||||| || || || | |||||| | || || || ||||| || ||
Sbjct 3647819 ATGGTTAAGATAAACGTGAGCATCGCCTATGGTGTGGATGAATTCACCGGGCTTCAGACC 3647760
Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050
||||| ||||| | | || |||||||| | ||| ||| ||||||||||| || ||
Sbjct 3647759 CGTCACATGGGCTATTAAATAAGTGAGCAGAGCATAGGAGGCAATGTTGAAGGGAACACC 3647700
Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC----- 147105
|| |||||||| | | || || |||||||| || | || || | || |
Sbjct 3647699 GAGACCCATGTCAGCGCTGCGTTGATATAGCTGGCAGGACAATTCGCCCTTGGACTGCGA 3647640
Query 147106 -ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164
|| | ||||| |||| ||||||||||| |||||||| ||| | ||| ||
Sbjct 3647639 GACAAAGAACTGAACCAGGCAATGGCACGGCGGTAGCGCCATTTTGGGTATATCCATCGG 3647580
Query 147165 GTTCCAGGCCGA 147176
|||||||| ||
Sbjct 3647579 ATTCCAGGCGGA 3647568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583389317592000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |