Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq3134 116 1e-20
seq466 86.0 2e-11
>seq3134
Length=2474545
Score = 116 bits (128), Expect = 1e-20
Identities = 116/148 (78%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 443716 TCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGG 443775
|||| ||||||| || || || | || ||||||||||||||| || || ||||| |||
Sbjct 573757 TCGCATTTGCTGCTGTTGAGGGCATCTTCTTTAGCGGCAGCTTT-GCTTCTATCTTTTGG 573815
Query 443776 TTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGAC 443835
|||| |||||||| ||||||| ||| || || || |||||||||||| || |||
Sbjct 573816 CTGAAGAAGCGTGGCCTTATGCCCGGCCTCACTTTCTCGAACGAACTGATCTCCCGCGAC 573875
Query 443836 GAGGGTTTGCATTGCGACTTCGCCTGTC 443863
||||| ||||||||||||| | |||||
Sbjct 573876 GAGGGACTGCATTGCGACTTTG-CTGTC 573902
>seq466
Length=100518
Score = 86.0 bits (94), Expect = 2e-11
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 254979 TACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAAC 255038
|||||||| | | || || ||||| ||||| ||||| |||||||| || || || |||
Sbjct 41649 TACCAATGCTTAGAGTATTTAACAATGTGGCACGCTATGTCGATCAGGGTGGTGGTAAAA 41708
Query 255039 GCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCA 255075
| |||||||| ||| | || ||||||||||| |||||
Sbjct 41709 GACCAGGAGCATTCGCTATTTACCTGGAGCCTTGGCA 41745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588060656990850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |