Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3023 123 3e-23
>seq3023
Length=5802038
Score = 123 bits (136), Expect = 3e-23
Identities = 290/427 (68%), Gaps = 12/427 (3%)
Strand=Plus/Plus
Query 178883 AACCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 178942
|||| ||||||||||| |||| || ||||| || ||||| || | | || |||||
Sbjct 628861 AACCAGTGCCGATGCCCTCGGCGCCATTCACCAGTACCATCGGTATAATGGGAATATACC 628920
Query 178943 AGTCTGGTTCAATCGCAC-GCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTC 179001
| ||| ||||| || | | || ||||| || ||| | |||| ||| || ||| |
Sbjct 628921 AAATTGGCTCAAT-GCGCTGACCATCATCGACCTGATACTGCAGCAGGGGATCATCCAAC 628979
Query 179002 GGATCAAAGATTTTACGAGCATCCCTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 179057
|||| | |||| ||| | | || || | |||||| || || | || | |
Sbjct 628980 GGATGATAGATGAGACGTGTTAGC--GGCGACATCAATGTGAAAATATAACGAGCGCTCG 629037
Query 179058 AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATT 179117
|| ||| |||||||| ||||||| || || || ||||| | ||||| | | |||
Sbjct 629038 C-ACA-ATCCTTGCCACCAGTGAGACGTGTACCGAACTGACCGCGCGGCTCCAACAAATT 629095
Query 179118 GATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGA 179176
|||||||||||| |||| | | | ||||| || ||||| || ||| || ||||| |
Sbjct 629096 GATATTGTTTGAGCCCACAAAATTCTGTGCCAAATTCACAATGGTCATCTGC-AGGGACA 629154
Query 179177 CTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCA 179236
|| |||||||| || || ||| | || ||||| | ||| ||| || ||||| ||||
Sbjct 629155 TCTCGCCGTGATGATAGGCTGACATTTCAGCCACCGAACCCGACAATTGGGCCACTTTCA 629214
Query 179237 TCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGA 179296
|||| ||| ||| | |||||||| | |||| ||||| | || ||||| |
Sbjct 629215 CCTCACGCTTATCGTTACGCTTGAAGCACGTAAACATGACCTTGCGCTGACCGGGCTTAA 629274
Query 179297 GGCCGTC 179303
|||| ||
Sbjct 629275 GGCCATC 629281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618330607146800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |