Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3383 300 5e-76 seq3289 179 1e-39 seq3169 179 1e-39 seq3603 150 5e-31 seq359 147 7e-30 seq3133 143 8e-29 seq3250 125 2e-23 seq466 120 9e-22 >seq3383 Length=19223366 Score = 300 bits (332), Expect = 5e-76 Identities = 961/1471 (65%), Gaps = 31/1471 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| || || || || ||||| || | ||| | || ||| Sbjct 7899054 GCTGTTGGTATTGATTTGGGCACAACCTACTCTTGCGTGGGTGTGTTCCAGCATGGCAAG 7898995 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || ||||| ||||| | || || ||||| || ||||| || || Sbjct 7898994 GTTGAGATCATTGCCAACGATCAGGGTAATCGTACCACCCCATCCTATGTTGCCTTCACG 7898935 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||||||| | || || || || | || ||||||| | Sbjct 7898934 GAGACGGAGCGTTTGATTGGTGATGCCGCCAAGAACCAGGTGGCCATGAATCCAACTCAA 7898875 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 ||| | |||||||||||||| ||||||||| | | || ||| | ||||| Sbjct 7898874 ACGATCTTTGATGCTAAGCGTCTTATTGGTCGCAAATTCGATGATGCGGCCGTGCAATCC 7898815 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT---AAACCAATTATT 349495 || | || || | || || || ||| || || |||| || || | ||| Sbjct 7898814 GACATGAAGCACTGGCCCTTCGAGGTCGTT-----AG-CGTTGATGGCAAGCCCAAGATT 7898761 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTT-TTACCCGAAGAAATTTCATCAATGGT 349554 || ||| || || | ||| || || | ||| || ||||| || || || || ||||| Sbjct 7898760 GAAGTTACGTACAAGGATGAG-AAGAAGACTTTCTTCCCCGAGGAGATCTCCTCCATGGT 7898702 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || ||||||||||| | || || || || | || | || || || |||| || Sbjct 7898701 GTTGACCAAAATGAAGGAGACCGCCGAGGCGTACCTGGGCAAGACGGTTACCAATGCCGT 7898642 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| || |||||||| || || | |||||| || || || |||||||| | Sbjct 7898641 CATCACTGTGCCTGCCTATTTCAACGACTCACAGCGTCAGGCGACTAAGGATGCTGGTAC 7898582 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || || || || | | || ||||| || || ||||| || || ||||| || Sbjct 7898581 CATCGCCGGTTTGAACGTATTGCGTATTATTAACGAGCCAACTGCCGCGGCCATTGCCTA 7898522 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 ||| || || || | | | ||| ||| | | ||||| ||||| || || || Sbjct 7898521 TGGTCTGGACAAGAAGGCGGTTGGAGAGCGTAATGTGTTGATTTTCGATTTGGGCGGCGG 7898462 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || | || | |||| || || || || || || ||| | || || Sbjct 7898461 TACCTTCGATGTCTCCATTCTGTCTATTGATGACGGCATCTTCGAGGTCAAATCTACGGC 7898402 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||||| ||| | ||||| || || ||||| |||||||| || | || ||||| | Sbjct 7898401 CGGTGATACCCATTTGGGTGGTGAGGACTTTGACAATCGTCTAGTCACTCACTTTGTACA 7898342 Query 349915 AGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGA-TAATCCTAGAGCAATGCGTCGC 349972 || || ||||| ||||| || | ||| ||| | || | || ||||||| Sbjct 7898341 GGAGTTCAAGCG-CAAGCACAAGAAGGAT-TTGACCACCAACAAGCGTGCTCTGCGTCGT 7898284 Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032 || | || || ||||| ||||| |||||| | ||||||| | || || | ||| Sbjct 7898283 CTGCGCACCGCCTGTGAGCGTGCAAAGCGTACGCTATCATCCTCCACTCAGGCTAGCATT 7898224 Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092 ||||||||||| || || || | ||||||| | | || || || |||||||| || Sbjct 7898223 GAAATTGATTCGCTGTTCGAAGGTACCGATTTCTATACCTCGATCACGCGTGCTCGTTTC 7898164 Query 350093 GAAGAATTATGTATG--GATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || || || | | |||||||| | ||| || |||||||| ||||| || | | Sbjct 7898163 GAGGA--GCTGAACGCCGATCTTTTCCGCAGC-ACCATGGATCCCGTGGAGAAGGCTCTG 7898107 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAG--ATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 ||||| || || | || || | ||| | || | || | || ||||| || | Sbjct 7898106 CGTGATGCCAAGCTG--GACAAGTCGGCTATTCACGATATTGTGCTGGTCGGTGGCTCCA 7898049 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267 | ||||| || || || || | | || || | || || ||||| || | | Sbjct 7898048 CTCGTATCCCCAAGGTGCAGCGCCTGTTACAGGATCTGTTCAACGGCAAGGAGCTGAACA 7897989 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTAT 350327 || || ||||| ||||| |||||||| ||||||||||| || ||||| | || || Sbjct 7897988 AGTCCATCAATCCCGATGAGGCTGTTGCCTATGGTGCTGCCGTCCAGGCTGCCATCTTGC 7897929 Query 350328 CTGGAAATAAGAGTTCTAA--AATTG-ATGATCTATTACTACTAGATGTAACTCCACTTT 350384 || | ||| || | | || | ||||| | || || ||||| || || || | Sbjct 7897928 ACGGTGACAAG---TCGCAGGAGGTGCAGGATCTGCTGCTGCTCGATGTTACCCCCCTGT 7897872 Query 350385 CGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTG 350444 | || || | || ||| |||||| || |||| || || || | || | || Sbjct 7897871 CTCTGGGTATCGAGACTGCTGGTGGCGTGATGAGCGTGCTCATCAAGCGTAACACCACCA 7897812 Query 350445 TACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAA 350504 | || || || || | || || || | || | | | ||||||||||| | || | Sbjct 7897811 TTCCCACTAAGCAGACGCAGACCTTCACCACCTATTCGGATAATCAGCCTGGTGTGTTGA 7897752 Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564 | ||||| | ||||| || || || || || ||||| ||| | || |||| Sbjct 7897751 TCCAAGTGTACGAAGGCGAGCGCGCCATGACCAAGGATAACAATCTGTTGGGCAAATTCG 7897692 Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624 || | || |||||| || | || || || |||||||| || | ||||||| Sbjct 7897691 AGCTGTCGGGTATCCCACCAGCACCACGCGGTGTGCCCCAGATTGAGGTGACCTTCGATA 7897632 Query 350625 TTGATTCAAATGGTATTTTAAATGTTACCGC 350655 ||||| | || |||||| | ||||||||||| Sbjct 7897631 TTGATGCCAACGGTATTCTGAATGTTACCGC 7897601 Score = 86.0 bits (94), Expect = 2e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | Sbjct 17126975 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGATCGATG 17126916 Query 235950 CCCAGCATCTCCATA 235964 ||| ||||||||||| Sbjct 17126915 CCCCGCATCTCCATA 17126901 >seq3289 Length=20206255 Score = 179 bits (198), Expect = 1e-39 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | ||| | |||||||||||| || ||||| || ||||| Sbjct 14369568 CCACCACGCAGGCGGAGCACCAAATGCAAAGTAGACTCTTTCTGGATATTGTAGTCAGAA 14369627 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || |||||||| | || || ||||| || |||| ||| |||||||| |||||| Sbjct 14369628 AGGGTGCGACCATCTTCCAACTGCTTGCCAGCGAAAATTAAACGCTGCTGATCTGGAGGA 14369687 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||||||||| ||||| || || ||||| ||||| || || | ||| || ||||| || Sbjct 14369688 ATTCCTTCTTTGTCCTGGATCTTGGCTTTAACATTCTCGATGGTATCCGACGGTTCGACC 14369747 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || |||||||||||||| ||||| Sbjct 14369748 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTTACAAAAATTTGCAT 14369794 >seq3169 Length=10161210 Score = 179 bits (198), Expect = 1e-39 Identities = 618/956 (65%), Gaps = 12/956 (1%) Strand=Plus/Minus Query 349367 AATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC--A 349424 ||| | || ||||||||||| ||||| ||||| | ||||| | | || |||| Sbjct 3947452 AATGCCAAGAATACGGTTTTCGATGCGAAGCGTTTAATTGGACGCAAGTTCGATGACCGT 3947393 Query 349425 AATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA 349484 || |||| | ||||| ||||||| || || | | || || || || || | | Sbjct 3947392 AAGATACAGGA--GGATCTGAAACATTGGCCCTTCA-AGGTGATC--AACGATGGGGGCA 3947338 Query 349485 AACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTT 349544 | |||| |||||||| || | |||||||||| || | ||| ||||| || | Sbjct 3947337 AGCCAAAAATTGAGGTCGAGTTCAAAGGTGAACGTAAGCGTTTTGCCCCCGAGGAGGTCA 3947278 Query 349545 CATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAA 349604 || ||||| || || ||| ||||| || || | ||| | || | | || | Sbjct 3947277 GCTCTATGGTATTGACCAAGATGCGTGAAATCGCCGAGGTTTATCTGGGCGGCAAGGTGA 3947218 Query 349605 CTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAG 349664 ||||| ||||| || || || || ||||| |||||| | |||||| || || |||| Sbjct 3947217 AGGATGCGGTTATCACAGTGCCGGCATATTTCAATGATTCACAGCGTCAGGCCACTAAAG 3947158 Query 349665 ATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAG 349724 |||| ||| ||| || || || ||||| || |||| || ||||| || || ||||| | Sbjct 3947157 ATGCCGGCTCCATAGCCGGTTTGAATGTGCTCCGAATCATCAATGAGCCGACGGCTGCCG 3947098 Query 349725 CAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784 | | || ||||| || || || | | || ||| | | || ||||||| Sbjct 3947097 CCCTAGCCTATGGCCTGGACAAGAACCTAAAGGGGGAGCGTAATGTGTTGATATTTGATT 3947038 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAAG 349841 | || || || || |||||||| || |||| || | || ||||| | || || | Sbjct 3947037 TGGGCGGCGGCACCTTTGATGTCTCCATACTGACCATCGATGAGGGTTCGCTGTTCGAGG 3946978 Query 349842 TTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTT 349901 | || || ||||| || ||||||||||| || || || || ||||| ||||| || || Sbjct 3946977 TCAAGGCCACTGCGGGCGATACACATCTGGGCGGCGAGGACTTTGACAATCGACTTGTCA 3946918 Query 349902 CGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGA 349960 || ||||| |||| ||||| || |||| ||||| | ||| ||| | Sbjct 3946917 ATCACTTTGTGGAAGAGTTTAAACG-GAAGCATAAAAGCAACATTACCAGCAATGTGCGT 3946859 Query 349961 GCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACC 350020 || |||| || || | ||||| || || || || ||||| | | || || | || Sbjct 3946858 GCTCTGCGCCGGCTGCGTACTGCCTGCGAGCGGGCCAAGCGGACGCTCTCCTCCAGCACG 3946799 Query 350021 CAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACA 350080 || |||| | || |||||| | || ||| |||| ||||||| |||| || | Sbjct 3946798 GAAGCCTCATTGGAGATTGATGCACTGCATGAGGGCATTGATTTCTATTCAAAGATATCG 3946739 Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAA 350140 ||||| || || || || | ||||||||||| | | || || || || ||||| Sbjct 3946738 CGTGCACGCTTCGAGGAGCTGAACATGGATCTTTTCCGCTCGACCATAGAGCCGGTGGAG 3946679 Query 350141 AAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGT 350200 | | || ||||| |||||| ||| || || | || || || | || ||| Sbjct 3946678 CGTGCCCTGAACGATGCCAAAATGGACAAGAAGGCCATACACGATGTGGTCCTGGTGGGT 3946619 Query 350201 GGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAA 350260 || || || || || || || | || | | || || || ||| ||||| | Sbjct 3946618 GGCTCCACGCGCATACCGAAGATCCAGCGTCTGCTGCAGGACTTCTTTGGCGGCAAGCAG 3946559 Query 350261 CCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 | | || |||||||| ||||| || || || ||||| || || ||||| || Sbjct 3946558 CTCAATTTGTCCATTAATCCCGATGAGGCGGTAGCCTATGGCGCCGCCGTTCAAGC 3946503 Score = 93.3 bits (102), Expect = 1e-13 Identities = 122/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 349190 aaaaaaaCCG-CTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCA 349248 |||| |||| | || || |||||| | || || || ||||| || || | ||| ||||| Sbjct 3948232 AAAAGCACCGGCAATTGGCATCGATCTGGGCACAACCTATTCCTGCGTGGGTGTCTGGCA 3948173 Query 349249 AAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGT 349308 || || || ||||| ||||| |||||||| || || | ||||||||||| || || Sbjct 3948172 GAACAATAAAGTGGAAATTATTGCCAATGATCAGGGCAATCGCACAACGCCATCGTATGT 3948113 Query 349309 TGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCA 349356 || |||| ||||| || || | ||||| ||| | || || ||||| Sbjct 3948112 GGCCTTTAATGAAACGGAACGCCTTATTGGCGATGCCGCTAAGAATCA 3948065 >seq3603 Length=2672878 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || | || | ||| ||||| |||||||| || || || Sbjct 316360 ATACCACCACGCAGACGCAGCACCAAGTGCAAAGTCGACTCCTTTTGAATGTTGTAGTCC 316301 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || |||||||| ||||| |||||||| || Sbjct 316300 GAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGT 316241 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| |||||||| || || |||||||| || ||||| || || | ||||| || || Sbjct 316240 GGAATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCG 316181 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || | ||||| ||||| || ||||| ||||| || |||||| Sbjct 316180 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCATT 316130 >seq359 Length=456481 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || || || || || || || ||||| Sbjct 66578 CATACCACCACGCAGACGAAGCACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAATC 66519 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || |||||||| ||||| || || |||||||| ||||| ||||| || || Sbjct 66518 TGACAACGTGCGTCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGG 66459 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| ||||| || || |||||||| || || || || || ||||| | |||| || || Sbjct 66458 AGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTCTCAATGGTATCACTAGGCTC 66399 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| |||||||| || || || || || || |||||||| Sbjct 66398 CACCTCCAGAGTAATGGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 66348 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || || ||||| || || Sbjct 66806 CATACCACCACGCAGACGAAGCACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTC 66747 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| ||||| || || |||||||| ||||| ||||| || || Sbjct 66746 AGAGAGAGTGCGACCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGG 66687 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || || || || || || || || || || |||| ||| || || || Sbjct 66686 AGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATCGTATCGGAAGGCTC 66627 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| |||||||| || || || || || || |||||||| Sbjct 66626 CACCTCCAGAGTAATGGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 66576 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || || ||||| || || Sbjct 66350 CATACCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTC 66291 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| ||||| || || || ||||| ||||| ||||| || || Sbjct 66290 AGAGAGAGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 66231 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| ||||| || || || || || || || || || || || |||| ||| || || || Sbjct 66230 AGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATCGTATCGGAAGGCTC 66171 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| |||||||| || || || || || || |||||||| Sbjct 66170 CACCTCCAGAGTAATGGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 66120 Score = 140 bits (154), Expect = 1e-27 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || || || || || || Sbjct 66122 CATACCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 66063 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| ||||| || || || ||||| ||||| ||||| || || Sbjct 66062 AGAGAGAGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 66003 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| ||||| || || || || || || || || || || || |||| ||| || || || Sbjct 66002 AGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATCGTATCGGAAGGCTC 65943 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | |||||||| || | |||||||| || ||||||||| Sbjct 65942 CACCTCCAGGGTGATGGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCATT 65891 >seq3133 Length=4096053 Score = 143 bits (158), Expect = 8e-29 Identities = 450/689 (65%), Gaps = 15/689 (2%) Strand=Plus/Minus Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606 || ||||| | || ||||||||||| | || |||||||| || || || | | Sbjct 3076451 TCGATGGTGCTTGTAAAAATGAAGGAGACAGCCGAAGCATACTTGGGCACCACCATCAGA 3076392 Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || || || || || ||||| || |||||| | |||||| || || || || Sbjct 3076391 GACGCCGTCATCACGGTGCCTGCCTACTTCAATGATTCGCAGCGTCAGGCCACCAAGGAC 3076332 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || ||| || ||||| || || || | || || || || ||||| ||||| ||| Sbjct 3076331 GCCGGTGCCATCGCCGGGTTGAACGTGCTGCGCATCATCAACGAGCCCACGGCTGCGGCA 3076272 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCA---AGaaaaaaaTATTCTTATTTTTGAT 349783 | || ||||| || ||||| || | | | ||| ||| |||| || || || Sbjct 3076271 TTGGCCTATGGCCTGGATAA---GAATCTCAAGGGTGAACGCAATGTTCTAATATTCGAC 3076215 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAA 349840 || || || || || || ||||| || | || || | || ||||| | || || Sbjct 3076214 TTGGGCGGCGGCACCTTCGATGTCTCGATTCTGACCATCGACGAGGGCTCTCTGTTCGAG 3076155 Query 349841 GTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTT 349900 || | |||||||| |||||||||||||| || || || || || || | || || Sbjct 3076154 GTGCGGTCGACTGCTGGAGATACACATCTTGGAGGCGAGGACTTCGACAACAGGCTAGTC 3076095 Query 349901 TCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAG 349959 || || | | | || || ||||| |||| ||| | ||| | | ||||| | Sbjct 3076094 AACCACTTCGCTGACGAGTTCAAGCG-CAAGTTTAAGAAGGATCTACGCTCCAATCCACG 3076036 Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 ||| |||| ||||| | ||||| || | || ||||| |||| || || | | Sbjct 3076035 AGCGCTGCGCCGCCTGCGGACTGCCGCCGAGAGAGCAAAGCGCACCTTGTCCTCAAGCAG 3075976 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTAC 350079 | || |||| ||||| || ||| | || || || | || |||| || |||| Sbjct 3075975 CGAAGCCTCGATTGAGATCGATGCCCTGTTCGAGGGTCACGACTTCTACACAAAGATTAG 3075916 Query 350080 ACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTT--AGAGCAACAATGGATCCTGTG 350137 || || || || || || | || || ||| || |||| ||| | | || ||| Sbjct 3075915 TCGGGCGCGCTTCGAGGAGCTGTGCGGCGA-CTTGTTCCGGAGC-ACACTACAGCCGGTG 3075858 Query 350138 GAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTT 350197 || || | |||| ||||| |||||| ||||| |||||| | || | ||| | || Sbjct 3075857 GAGAAGGCTCTAAACGATGCCAAAATGGACAAAAGCCAGATTAACGACATTGTTCTGGTA 3075798 Query 350198 GGTGGTTCTACACGTATTCCAAAAGTTCA 350226 || || || ||||| ||||||||||| || Sbjct 3075797 GGCGGCTCCACACGCATTCCAAAAGTGCA 3075769 Score = 138 bits (152), Expect = 3e-27 Identities = 449/689 (65%), Gaps = 15/689 (2%) Strand=Plus/Plus Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606 || ||||| | || ||||||||||| | || |||||||| || || || | | Sbjct 3078842 TCGATGGTGCTTGTAAAAATGAAGGAGACAGCCGAAGCATACTTGGGCACCACCATCAGA 3078901 Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || || || || || || || ||||| || |||||| | |||||| || || || || Sbjct 3078902 GACGCCGTCATCACGGTGCCTGCCTACTTCAATGATTCGCAGCGTCAGGCCACCAAGGAC 3078961 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || || || ||||| || || || | || || || || ||||| ||||| ||| Sbjct 3078962 GCCGGTGCAATCGCCGGGTTGAACGTGCTGCGCATCATCAACGAGCCCACGGCTGCGGCA 3079021 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCA---AGaaaaaaaTATTCTTATTTTTGAT 349783 | || ||||| || ||||| || | | | ||| ||| |||| || || || Sbjct 3079022 TTGGCCTATGGCCTGGATAA---GAATCTCAAGGGTGAACGCAATGTTCTAATATTCGAC 3079078 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG---AATTTTTGAA 349840 || || || || || || ||||| || | || || | || ||||| | || || Sbjct 3079079 TTGGGCGGCGGCACCTTCGATGTCTCGATTCTGACCATCGACGAGGGCTCTCTGTTCGAG 3079138 Query 349841 GTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTT 349900 || | |||||||| |||||||||||||| || || || || || || | || || Sbjct 3079139 GTGCGGTCGACTGCTGGAGATACACATCTTGGAGGCGAGGACTTCGACAACAGGCTAGTC 3079198 Query 349901 TCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAG 349959 || || | | | || || ||||| |||| ||| | ||| | | ||||| | Sbjct 3079199 AACCACTTCGCTGACGAGTTCAAGCG-CAAGTTTAAGAAGGATCTACGCTCCAATCCACG 3079257 Query 349960 AGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTAC 350019 ||| |||| ||||| | ||||| || | || ||||| |||| || || | | Sbjct 3079258 AGCGCTGCGCCGCCTGCGGACTGCCGCCGAGAGAGCAAAGCGCACCTTGTCCTCAAGCAG 3079317 Query 350020 CCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTAC 350079 | || |||| ||||| || ||| | || || || | || |||| || |||| Sbjct 3079318 CGAAGCCTCGATTGAGATCGATGCCCTGTTCGAGGGTCACGACTTCTACACAAAGATTAG 3079377 Query 350080 ACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTT--AGAGCAACAATGGATCCTGTG 350137 || || || || || || | || || ||| || |||| ||| | | || ||| Sbjct 3079378 TCGGGCGCGCTTCGAGGAGCTGTGCGGCGA-CTTGTTCCGGAGC-ACACTACAGCCGGTG 3079435 Query 350138 GAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTT 350197 || || | |||| ||||| |||||| ||||| |||||| | || | ||| | || Sbjct 3079436 GAGAAGGCTCTAAACGATGCCAAAATGGACAAAAGCCAGATTAACGACATTGTTCTGGTA 3079495 Query 350198 GGTGGTTCTACACGTATTCCAAAAGTTCA 350226 || || || ||||| ||||||||||| || Sbjct 3079496 GGCGGCTCCACACGCATTCCAAAAGTGCA 3079524 >seq3250 Length=7717345 Score = 125 bits (138), Expect = 2e-23 Identities = 249/367 (68%), Gaps = 5/367 (1%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || | |||||| | | || |||||||||| || ||||| ||| | Sbjct 1580367 CCCGAGGAGATCTCCGCCATGGTTCTCGGCAAGATGAAGGAAACCGCCGAAGCCTATCTG 1580426 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || |||||||| | ||||| || ||||| ||||| ||||||||||| Sbjct 1580427 GGCAAGAAGGTCACCCATGCTGTTGTCACTGTGCCCGCCTACTTTAACGATGCCCAGCGC 1580486 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || |||||| || | | || | | || || ||||| Sbjct 1580487 CAGGCGACCAAGGATGCAGGTGTCATTGCCGGTCTGCAGGTGATGCGCATCATCAATGAG 1580546 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTAT 349770 || || || || || |||||||| || || || || || ||| | || || ||| | Sbjct 1580547 CCGACAGCGGCTGCCATTGCATACGGTCTGGACAAGAAGGAGGG----CGAGAAGAATGT 1580602 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 ||| | |||||||| || || || || |||||||| || || || || | || | || Sbjct 1580603 GCTTGTCTTTGATTTGGGCGGCGGCACCTTTGATGTCTCCCTGCTGACCATCGACAATGG 1580662 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 | || || || || || |||||| || || | ||||| || || |||||| | Sbjct 1580663 TGTCTTCGAGGTGGTTGCCACCAATGGTGACACTCACTTGGGTGGCGAGGACTTTGATCA 1580722 Query 349891 TCGTCTC 349897 ||| || Sbjct 1580723 GCGTGTC 1580729 >seq466 Length=100518 Score = 120 bits (132), Expect = 9e-22 Identities = 303/458 (66%), Gaps = 2/458 (0%) Strand=Plus/Minus Query 206441 CAACACACTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATAC 206500 || ||| ||| || | ||| || || || |||||||| | ||||| || | | | Sbjct 41702 CACCACCCTGATCGACATAGCGTGCCACATTGTTAAATACTCTAAGCATTGGTACCAAGC 41643 Query 206501 CATTAGAAGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATAT 206560 |||| ||||| |||||||| || |||| |||| | ||| |||| ||| | || Sbjct 41642 CATTTGAAGTACCATTTGTGCCGGAAATAGAGGTGCCCTTTGCTCGAATACAATGAACAT 41583 Query 206561 GTAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAA 206620 | ||||| ||||||||| |||| || || | || || | | || ||| ||| | | Sbjct 41582 TAAGACCAATGCCTCCTGCCGATTTGGAGATCATTGCGCACTGCTCTACTGTTTTAAATA 41523 Query 206621 TTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTG 206680 |||| |||| | ||| | |||| | | | |||||| || |||||| || || Sbjct 41522 TTCCTTCAATAGAATCCGATGCCATTGTTAAAAGAAAACATGATGATAATTGGGGACGGT 41463 Query 206681 GCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAAT 206740 || ||||| ||| | || || | |||||||||||||| || || | ||||| Sbjct 41462 TTGTGGCAGCAGCAAAAAGCGTTGGTGATGCATGTGTAAAATAACGTTCCGATAGTAAAT 41403 Query 206741 TATAAGTAGTTTTCACTTTTTCTAAATCATTTTCGTGTAAACAAATTGCTACACGTAACC 206800 |||| || || | || | ||||| | |||| || |||||| ||||| | Sbjct 41402 TATATGTTTCAATCGCAGAATCAATATCATCACCATGTATACCAATTGCGACACGCATTA 41343 Query 206801 ACATATATTGAGGTCTTTCAATTAtttttttGTTAATGTGCATTAAATATGCACGCTCAA 206860 ||| | || |||| ||| |||||| ||||| | | ||||||| ||||||| Sbjct 41342 GCATGTGCTGTGGTCGTTCCGCTATTTTGCCATTAATTTTAAGCAAATATGATCGCTCAA 41283 Query 206861 GAGTTTTAAAGCCAAAATAATCTAT-TAAATAATCACG 206897 | || ||||| ||||| |||| ||| | | ||||||| Sbjct 41282 GTGTCTTAAATCCAAAGTAAT-TATATCCAAAATCACG 41246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514991725914590