Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12]
13,530 sequences; 206,026,697 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3134 95.1 1e-14
>seq3134
Length=2474545
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/149 (75%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 59986 TCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTC 60044
|||| || ||||| ||| || || || |||||||| ||| || | |||| ||
Sbjct 573754 TCATCGCATTTGC-TGCTGTTGAGGGCATCTTCTTTAGCGGCAGCTTTGCTTCTATCTTT 573812
Query 60045 TGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGG 60104
||||| || ||||||||||| ||||| ||||| | |||||| ||||| ||||| |||||
Sbjct 573813 TGGCTGAAGAAGCGTGGCCTTATGCCCGGCCTCACTTTCTCGAACGAACTGATCTCCCGC 573872
Query 60105 GACGAGGGCCTCCATCAGGAGTTTGCAGT 60133
|||||||| || ||| || ||||| ||
Sbjct 573873 GACGAGGGACTGCATTGCGACTTTGCTGT 573901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548432030743200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |