Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20virilis_20[refseq_20GCF_5F000005245.1_202006-07-12] 13,530 sequences; 206,026,697 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3134 95.1 1e-14 >seq3134 Length=2474545 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/149 (75%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 59986 TCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTC 60044 |||| || ||||| ||| || || || |||||||| ||| || | |||| || Sbjct 573754 TCATCGCATTTGC-TGCTGTTGAGGGCATCTTCTTTAGCGGCAGCTTTGCTTCTATCTTT 573812 Query 60045 TGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGG 60104 ||||| || ||||||||||| ||||| ||||| | |||||| ||||| ||||| ||||| Sbjct 573813 TGGCTGAAGAAGCGTGGCCTTATGCCCGGCCTCACTTTCTCGAACGAACTGATCTCCCGC 573872 Query 60105 GACGAGGGCCTCCATCAGGAGTTTGCAGT 60133 |||||||| || ||| || ||||| || Sbjct 573873 GACGAGGGACTGCATTGCGACTTTGCTGT 573901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548432030743200