Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq119 84.2 2e-11 >seq119 Length=24197627 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/143 (73%), Gaps = 6/143 (4%) Strand=Plus/Minus Query 22140 GGTTTGCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTCGGCC 22199 ||| ||||||| || ||||||||||| | ||||||| | |||||| |||| |||| || Sbjct 11134075 GGTCTGCACGGATTCCACGTGCACGAGTTCGGCGACAACACCAACGGCTGCATGTCGTCC 11134016 Query 22200 GGTGAGCATTTTAATCCCACCAATG---AGGACCACGGCGCTCCCGATGCTGAAATTAGG 22256 || ||| || |||||| ||| |||| ||||||||||||| | ||| | | Sbjct 11134015 GGACCGCACTTCAATCCCT---ATGGCAAGGAGCACGGCGCTCCCGTCGATGACAACCGC 11133959 Query 22257 CATGTTGGCGACTTGGGCAACAT 22279 || | || || ||||||||||| Sbjct 11133958 CACTTGGGGGATTTGGGCAACAT 11133936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410756131501922