Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq61 93.3 3e-14 >seq61 Length=22324452 Score = 93.3 bits (102), Expect = 3e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515 |||||||||| | || || | ||| |||||||| ||||| || || ||||| || | Sbjct 2962188 TGTCGTGTCAGCTCTACCAGAGGAGCGCCGATATGGGCCTGGGCGTGCCATTCAACATCG 2962129 Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACT 20575 | ||||| ||||| || | ||||| || ||||| || | | | || |||| |||| Sbjct 2962128 CCTCCTATGCCCTGCTCACCCACATGATCGCCCATGTGACGGGTCTGAAGCCGGGCGACT 2962069 Query 20576 TAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 | ||||||||||| || ||| |||| | ||||| || ||| | || || Sbjct 2962068 TTGTCCACACCATGGGCGACACGCACGTCTACCTGAACCATGTCGAGCC 2962020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399144481158235