Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq61 140 3e-28 >seq61 Length=22324452 Score = 140 bits (154), Expect = 3e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||||| || | ||| || || |||||||| ||| ||||||||||| | | Sbjct 7404238 GCGCTCGCATATGAACTGGGCGATGCGGTCGCCGTGCTTCACCTCGAAATCTACATCGGA 7404179 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||||| || ||||| | |||||||| || || |||| | |||||| ||||| Sbjct 7404178 GTGATTGAACAGAACGACGCCGAGATTGCCGCGATAATCCTCGTCCACCACGCCGGCGCC 7404119 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCC 5760 ||| |||||||||| ||| || || || ||||| || || ||||| ||||||||| | || Sbjct 7404118 CACATCGATGAAGTTCTTCACGGCAAGTCCGGAACGTGGGGCCACCCGGCCGTAGGAGCC 7404059 Query 5761 ATCGGGAAGCTGTATCTGCAGGTCCGT 5787 || || | ||| | |||||||| || Sbjct 7404058 CTCCGGTACCTGCACTTGCAGGTCGGT 7404032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430011825017576