Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq119 87.8 2e-12 >seq119 Length=24197627 Score = 87.8 bits (96), Expect = 2e-12 Identities = 219/332 (66%), Gaps = 3/332 (1%) Strand=Plus/Minus Query 127538 GGTTTGCACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCG 127597 ||| ||||||| || |||||||||||||||||||||| | ||||| |||| |||| | Sbjct 11134075 GGTCTGCACGGATTCCACGTGCACGAGTTCGGCGACAACACCAACGGCTGCATGTCGTCC 11134016 Query 127598 GGGGAACACTTCAATCCCACCGGTATGGATCACGGAGCGCCCAACGCGCTCGTTCGTCAC 127657 || |||||||||||| || | ||| ||||| || ||| || | || ||| Sbjct 11134015 GGACCGCACTTCAATCCCTATGGCAAGGAGCACGGCGCTCCCGTCGATGACAACCGCCAC 11133956 Query 127658 GTTGGCGACCTGGGCAACGTGGAGGCGGCTAGCAGCAATTCTTTGACCGAAGTCAACATC 127717 | || || |||||||| | || ||| | | || | | ||| | |||| |||| Sbjct 11133955 TTGGGGGATTTGGGCAACATTGA---GGCCACCGGCGACTGCCCCACCAAGGTCAGCATC 11133899 Query 127718 ATCGACCACGTCATGTCTCTGTACGGACCGAACAGCGTCATCGGTAGGAGTCTGGTCGTG 127777 | |||| | || | || | ||| | ||||| |||| || | | | |||||| Sbjct 11133898 ACCGACTCCAAGATCACGCTCTTCGGCGCCGACAGCATCATTGGACGCACCGTTGTCGTG 11133839 Query 127778 CACACGGATCGTGACGATCTCGGCCTGACCGATCATTATTTGAGCAAAACCACCGGCAAC 127837 ||| | ||| || ||||||||| | | || | ||||||| | || |||||| Sbjct 11133838 CACGCCGATGCCGATGATCTCGGCAAGGGTGGCCACGAGCTGAGCAAGTCAACGGGCAAC 11133779 Query 127838 TCGGGCGGTCGGTTGGGGTGCGGGATCATTGG 127869 | || | || | || ||||| | ||||| Sbjct 11133778 GCTGGTGCCCGCATTGGCTGCGGCGTTATTGG 11133747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537548613115080