Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 147 5e-30 seq1 147 5e-30 seq119 140 8e-28 seq67 140 8e-28 seq61 140 8e-28 >seq5 Length=900 Score = 147 bits (162), Expect = 5e-30 Identities = 175/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| ||| || || ||||| || |||| Sbjct 396 CATG-CCACCACGCAGACGCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 338 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || |||||||||||||| | || ||||| |||||||||| |||||| ||| | Sbjct 337 CGGACAGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGA---T 281 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| ||||| || || |||||||| || || || ||||| || || | |||| | Sbjct 280 CTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCGGATG 221 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 220 GCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 166 Score = 147 bits (162), Expect = 5e-30 Identities = 175/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| ||| || || ||||| || |||| Sbjct 852 CATG-CCACCACGCAGACGCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 794 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || |||||||||||||| | || ||||| |||||||||| |||||| ||| | Sbjct 793 CGGACAGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGA---T 737 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| ||||| || || |||||||| || || || ||||| || || | |||| | Sbjct 736 CTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCGGATG 677 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 676 GCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 622 Score = 143 bits (158), Expect = 6e-29 Identities = 149/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || |||||||||||||| | || ||||| |||||| Sbjct 584 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCGAAG 525 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| ||| |||||| ||||| || || |||||||| || || || ||| Sbjct 524 ATCAAACGCTGCTGA---TCTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACG 468 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| |||||||||||||| Sbjct 467 TTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTC 408 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 407 ACGAAGATCTGCAT 394 Score = 100 bits (110), Expect = 7e-16 Identities = 125/169 (74%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| ||| || || ||||| || |||| Sbjct 168 CATG-CCACCACGCAGACGCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 110 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || |||||||||||||| | || ||||| |||||||||| |||||| || || Sbjct 109 CGGACAGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTG---AT 53 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407 || |||||||| || || |||||||| || || || ||||| || || Sbjct 52 CTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGAT 4 >seq1 Length=21770863 Score = 147 bits (162), Expect = 5e-30 Identities = 175/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| ||| || || ||||| || |||| Sbjct 2175848 CATG-CCACCACGCAGACGCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 2175906 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || |||||||||||||| | || ||||| |||||||||| |||||| || || Sbjct 2175907 CGGACAGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTG---AT 2175963 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || |||||||| || || |||||||| || || || ||||| || || | |||| | Sbjct 2175964 CTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCGGATG 2176023 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 2176024 GCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 2176078 Score = 143 bits (158), Expect = 6e-29 Identities = 149/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || |||||||||||||| | || ||||| |||||| Sbjct 2175660 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTGCTTTCCGGCGAAG 2175719 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 2175720 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACG 2175776 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| |||||||||||||| Sbjct 2175777 TTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTC 2175836 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 2175837 ACGAAGATCTGCAT 2175850 Score = 132 bits (146), Expect = 1e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| ||| || || |||||||| |||| Sbjct 2176076 CATG-CCACCACGCAGACGCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATATTGTAGT 2176134 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||||||||| || || || ||||| |||||||||| |||||| || || Sbjct 2176135 CGGACAGGGTGCGTCCGTCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTG---AT 2176191 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || |||||||| || || |||||||| || || || ||||| || || | |||| | Sbjct 2176192 CTGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCGGATG 2176251 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 2176252 GCTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTGCAT 2176306 >seq119 Length=24197627 Score = 140 bits (154), Expect = 8e-28 Identities = 148/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| ||||| | ||| || || |||||| Sbjct 4459594 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGTTGCTTGCCGGCGAAG 4459653 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || ||||| || || || || ||||| Sbjct 4459654 ATCAGACGCTGCTG---ATCTGGGGGGATTCCCTCCTTATCTTGAATCTTAGCCTTCACA 4459710 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || ||||| || ||||| ||||| |||||||||||||| Sbjct 4459711 TTCTCAATGGTGTCCGACGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTC 4459770 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4459771 ACGAAGATCTGCAT 4459784 Score = 140 bits (154), Expect = 8e-28 Identities = 148/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || |||||||||||||| | ||| || || |||||| Sbjct 4459822 TCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAG 4459881 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || |||||||| || || || ||||| Sbjct 4459882 ATCAGACGCTGCTG---ATCTGGGGGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACA 4459938 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || | ||||| ||||| |||||||||||||| Sbjct 4459939 TTCTCAATGGTGTCCGACGGCTCAACCTCCAAAGTGATGGTCTTTCCGGTCAGAGTCTTC 4459998 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4459999 ACGAAGATCTGCAT 4460012 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || |||||||||||||| | ||| || || |||||| Sbjct 4460418 TCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAG 4460477 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4460478 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4460534 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| |||||||||||||| Sbjct 4460535 TTCTCAATGGTGTCTGATGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTC 4460594 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4460595 ACGAAGATCTGCAT 4460608 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || |||||||||||||| | ||| || || |||||| Sbjct 4460646 TCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAG 4460705 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4460706 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4460762 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| |||||||||||||| Sbjct 4460763 TTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTC 4460822 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4460823 ACGAAGATCTGCAT 4460836 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || |||||||||||||| | ||| || || |||||| Sbjct 4459159 TCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAG 4459218 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4459219 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4459275 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4459276 TTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4459335 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4459336 ACGAAGATCTGCAT 4459349 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || |||||||||||||| | ||| || || |||||| Sbjct 4460874 TCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAG 4460933 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4460934 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4460990 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4460991 TTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4461050 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4461051 ACGAAGATCTGCAT 4461064 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | || |||||||| || |||| ||||| || |||||| Sbjct 4458703 TCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCCTCTAGCTGTTTGCCGGCGAAG 4458762 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4458763 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4458819 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4458820 TTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4458879 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4458880 ACGAAGATCTGCAT 4458893 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| || || | ||||| || |||||| Sbjct 4458931 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTCGAGCTGTTTGCCGGCGAAG 4458990 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4458991 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4459047 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4459048 TTCTCAATGGTGTCTGATGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4459107 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4459108 ACGAAGATCTGCAT 4459121 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| || || | ||| || || |||||| Sbjct 4460050 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCGGCGAAG 4460109 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4460110 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4460166 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4460167 TTCTCAATGGTGTCTGATGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4460226 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4460227 ACGAAGATCTGCAT 4460240 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| || || | || || || |||||| Sbjct 4461102 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAG 4461161 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4461162 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4461218 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4461219 TTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4461278 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4461279 ACGAAGATCTGCAT 4461292 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| || || | || || || |||||| Sbjct 4461425 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAG 4461484 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || ||||| || || || ||||| || || ||||| Sbjct 4461485 ATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTCACA 4461541 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| ||||| ||||||| |||||| Sbjct 4461542 TTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 4461601 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 4461602 ACGAAGATCTGCAT 4461615 Score = 114 bits (126), Expect = 3e-20 Identities = 151/207 (73%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || |||||||| || || | || || || |||||| Sbjct 4461653 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAG 4461712 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || |||||||| || || || ||||| Sbjct 4461713 ATCAGACGCTGCTG---ATCTGGGGGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACA 4461769 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || |||| ||||| Sbjct 4461770 TTCTCAATGGTATCGGAAGGCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTC 4461829 Query 288460 ACGAATATCTGCA--TTATGTTATTCT 288484 || || ||||||| ||| ||||||| Sbjct 4461830 ACAAAGATCTGCATTTTAGATTATTCT 4461856 >seq67 Length=2158 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| | ||| ||||| || ||||| | || || || |||||| Sbjct 1131 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 1072 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| ||||| ||||||||||| ||||| || || ||||| || Sbjct 1071 ATCAGACGCTGCTGA---TCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 1015 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| |||| ||| || ||| || || || ||||| ||||| || || || ||||| Sbjct 1014 TTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTA 955 Query 288460 ACGAATATCTGCATTATGTTATTC 288483 ||||| |||||||| || ||||| Sbjct 954 ACGAAGATCTGCATCTTG-TATTC 932 >seq61 Length=22324452 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| | ||| ||||| || ||||| | || || || |||||| Sbjct 13090664 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 13090605 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| ||||| ||||||||||| ||||| || || ||||| || Sbjct 13090604 ATCAGACGCTGCTGA---TCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 13090548 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| |||| ||| || ||| || || || ||||| ||||| || || || ||||| Sbjct 13090547 TTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTA 13090488 Query 288460 ACGAATATCTGCATTATGTTATTC 288483 ||||| |||||||| || ||||| Sbjct 13090487 ACGAAGATCTGCATCTTG-TATTC 13090465 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| ||||| || | || || || |||||| Sbjct 4253733 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 4253674 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| |||||| || || || ||||||||||| || || || || Sbjct 4253673 ATCAGACGCTGCTGA---TCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACA 4253617 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || || | ||||| ||||| ||||| || || || Sbjct 4253616 TTCTCGATGGTGTCAGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTC 4253557 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 4253556 ACGAAGATTTGCAT 4253543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179531626362394