Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq104 102 1e-16 >seq104 Length=21139217 Score = 102 bits (112), Expect = 1e-16 Identities = 168/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 175928 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 175987 |||||||| ||| | | || || ||||||||||| | |||||||| ||||| || ||| Sbjct 5947162 TCTTTGCCTCCCGTCAAGCGGGTACCAAATTGACCGCGAGGCTCAAGCAGATTAATGTTG 5947221 Query 175988 TTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCACC 176046 || | |||| | ||| | || | || || || || ||| || ||||| || || || Sbjct 5947222 TTGGCACCCACAAAGTTCTGGGCTAGATTCACGATTGTCATCTGC-AGGGAAACCTCTCC 5947280 Query 176047 GTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCATC 176106 ||| |||||||| ||| | || ||||| | | | | ||| || ||||| | |||| Sbjct 5947281 GTGGTGGTAGGCTGACATCTCGGCCACCGATCCGGATAGCTGGGCTACCTTAACCTCACG 5947340 Query 176107 CTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTC 176166 |||| ||| | | ||||| | |||| ||||||| ||| ||||| | |||||| Sbjct 5947341 CTTGTCGTTTCTCTTAAAGCAAGTGAACATCACCTTTCGCTGACCCGGCTTTAAGCCGTC 5947400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613444906012680