Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq119 167 5e-36 seq67 134 3e-26 seq61 134 3e-26 seq5 120 7e-22 seq1 120 7e-22 >seq119 Length=24197627 Score = 167 bits (184), Expect = 5e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | |||||| | ||||| || Sbjct 4461083 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTC 4461142 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4461143 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4461202 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| ||| || ||||| ||||| | ||||| Sbjct 4461203 GATCTTAGCCTTCACATTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTT 4461262 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | ||||| Sbjct 4461263 TCCGGTCAAAGTCTTCACGAAGATCTGCAT 4461292 Score = 167 bits (184), Expect = 5e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | |||||| | ||||| || Sbjct 4461406 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTC 4461465 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4461466 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4461525 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| ||| || ||||| ||||| | ||||| Sbjct 4461526 GATCTTAGCCTTCACATTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTT 4461585 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | ||||| Sbjct 4461586 TCCGGTCAAAGTCTTCACGAAGATCTGCAT 4461615 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | |||||| | ||||| || Sbjct 4458912 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTC 4458971 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||| || || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4458972 GAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4459031 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| || || ||||| ||||| | ||||| Sbjct 4459032 GATCTTAGCCTTCACATTCTCAATGGTGTCTGATGGCTCAACTTCCAGGGTGATGGTCTT 4459091 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | ||||| Sbjct 4459092 TCCGGTCAAAGTCTTCACGAAGATCTGCAT 4459121 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||||| || || | || ||||| Sbjct 4459140 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTC 4459199 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4459200 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4459259 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| ||| || ||||| ||||| | ||||| Sbjct 4459260 GATCTTAGCCTTCACATTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTT 4459319 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | ||||| Sbjct 4459320 TCCGGTCAAAGTCTTCACGAAGATCTGCAT 4459349 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | |||||| | ||||| || Sbjct 4460031 AACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTC 4460090 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4460091 GAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4460150 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| || || ||||| ||||| | ||||| Sbjct 4460151 GATCTTAGCCTTCACATTCTCAATGGTGTCTGATGGCTCAACTTCCAGGGTGATGGTCTT 4460210 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | ||||| Sbjct 4460211 TCCGGTCAAAGTCTTCACGAAGATCTGCAT 4460240 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||||| || || | || ||||| Sbjct 4460855 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTC 4460914 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4460915 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4460974 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| ||| || ||||| ||||| | ||||| Sbjct 4460975 GATCTTAGCCTTCACATTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTT 4461034 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | ||||| Sbjct 4461035 TCCGGTCAAAGTCTTCACGAAGATCTGCAT 4461064 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| ||||| || || || |||||||| | |||||| | ||||| || ||||| Sbjct 4458690 GTGCAAAGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCATCCTCTAGCTG 4458749 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || |||||||| || || || || ||||||||||| || || |||||||| || || Sbjct 4458750 TTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTGGATCTT 4458809 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || |||||||||||||| ||| || ||||| ||||| | |||||||| || Sbjct 4458810 AGCCTTCACATTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTTTCCGGT 4458869 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 |||||| || ||||| | ||||| Sbjct 4458870 CAAAGTCTTCACGAAGATCTGCAT 4458893 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||||| || || | || ||||| Sbjct 4460627 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTC 4460686 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4460687 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4460746 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| ||| || ||||| ||||| | ||||| Sbjct 4460747 GATCTTAGCCTTCACATTCTCAATGGTGTCTGAAGGCTCAACTTCCAGGGTGATGGTCTT 4460806 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| ||| || ||||| | ||||| Sbjct 4460807 TCCGGTCAGAGTCTTCACGAAGATCTGCAT 4460836 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||||| || || | || ||||| Sbjct 4460399 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTC 4460458 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4460459 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4460518 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || |||||||||||||| || || ||||| ||||| | ||||| Sbjct 4460519 GATCTTAGCCTTCACATTCTCAATGGTGTCTGATGGCTCAACTTCCAGGGTGATGGTCTT 4460578 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| ||| || ||||| | ||||| Sbjct 4460579 TCCGGTCAGAGTCTTCACGAAGATCTGCAT 4460608 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | || || | |||||||| Sbjct 4459575 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTC 4459634 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||| || || || || || ||||| Sbjct 4459635 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCTTG 4459694 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| || ||||||||||||||||| || ||||| ||||| | ||||| Sbjct 4459695 AATCTTAGCCTTCACATTCTCAATGGTGTCCGACGGCTCAACTTCCAGGGTGATGGTCTT 4459754 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| ||| || ||||| | ||||| Sbjct 4459755 TCCGGTCAGAGTCTTCACGAAGATCTGCAT 4459784 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | |||||| | ||||| || Sbjct 4461634 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTC 4461693 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || || ||||| || || || || || || || Sbjct 4461694 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCCTG 4461753 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| || ||||||||||| || ||| ||||| || | || | ||||| Sbjct 4461754 AATCTTGGCCTTCACATTCTCAATGGTATCGGAAGGCTCCACCTCCAAAGTGATGGTCTT 4461813 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||| ||||| || || || || | ||||||| Sbjct 4461814 TCCAGTCAAGGTCTTCACAAAGATCTGCATTT 4461845 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||||| || || | || ||||| Sbjct 4459803 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTC 4459862 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||| || || || || || || || Sbjct 4459863 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCCTG 4459922 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| || ||||||||||||||||| || || || | || | ||||| Sbjct 4459923 AATCTTGGCCTTCACATTCTCAATGGTGTCCGACGGCTCAACCTCCAAAGTGATGGTCTT 4459982 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||| ||| || ||||| | ||||| Sbjct 4459983 TCCGGTCAGAGTCTTCACGAAGATCTGCAT 4460012 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | |||||| | ||||| || Sbjct 4459368 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCCTC 4459427 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4459428 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4459487 Query 195051 AATTTTTTGCTTGACGTTCTC 195071 || || ||| || ||||| Sbjct 4459488 GATCTTAGCCTTCACATTCTC 4459508 Score = 96.9 bits (106), Expect = 8e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||||| || || | || ||||| Sbjct 4460259 AACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCTTC 4460318 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || |||||||| || || || || ||||||||||| || || |||||||| Sbjct 4460319 CAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 4460378 Query 195051 AAT 195053 || Sbjct 4460379 GAT 4460381 >seq67 Length=2158 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || ||||| || || || | || || | |||||||| ||||| Sbjct 1144 GTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 1085 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || || ||||||||||| ||||||||||| ||||| || Sbjct 1084 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTT 1025 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || || || || ||||| ||| || ||||| || | ||||| || || Sbjct 1024 GGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGT 965 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 964 GAGGGTCTTAACGAAGATCTGCAT 941 >seq61 Length=22324452 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || ||||| || || || | || || | |||||||| ||||| Sbjct 13090677 GTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 13090618 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || || ||||||||||| ||||||||||| ||||| || Sbjct 13090617 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTT 13090558 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || || || || ||||| ||| || ||||| || | ||||| || || Sbjct 13090557 GGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGT 13090498 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 13090497 GAGGGTCTTAACGAAGATCTGCAT 13090474 >seq5 Length=900 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| |||| || || | || ||||| ||||| Sbjct 369 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTG 310 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 309 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 250 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | ||| | ||||| || || Sbjct 249 AGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGT 190 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | ||||| Sbjct 189 CAGAGTCTTCACGAAGATCTGCAT 166 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| |||| || || | || ||||| ||||| Sbjct 825 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTG 766 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 765 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 706 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | ||| | ||||| || || Sbjct 705 AGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGT 646 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | ||||| Sbjct 645 CAGAGTCTTCACGAAGATCTGCAT 622 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| |||| || || | || ||||| ||||| Sbjct 597 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTG 538 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 537 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 478 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | ||| | ||||| || || Sbjct 477 AGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGT 418 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | ||||| Sbjct 417 CAGAGTCTTCACGAAGATCTGCAT 394 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| |||| || || | || ||||| ||||| Sbjct 141 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTG 82 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 81 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 22 Query 195057 TTGCTTGACGTTCTCAATGGT 195077 |||||||||||| ||||| Sbjct 21 AGCCTTGACGTTCTCGATGGT 1 >seq1 Length=21770863 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| |||| || || | || ||||| ||||| Sbjct 2175875 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTG 2175934 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 2175935 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 2175994 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | ||| | ||||| || || Sbjct 2175995 AGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGT 2176054 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | ||||| Sbjct 2176055 CAGAGTCTTCACGAAGATCTGCAT 2176078 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| |||| || || | || ||||| ||||| Sbjct 2175647 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTG 2175706 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 2175707 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 2175766 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | ||| | ||||| || || Sbjct 2175767 AGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAGGTGATGGTCTTGCCGGT 2175826 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | ||||| Sbjct 2175827 CAGAGTCTTCACGAAGATCTGCAT 2175850 Score = 107 bits (118), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || |||||||| |||| || || | || || || | ||| Sbjct 2176103 GTGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGTCCGTCCTCCAACTG 2176162 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | || || || ||||| || || || || ||||| || || || Sbjct 2176163 CTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 2176222 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || || || || || | || | ||||| || || Sbjct 2176223 AGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAAGTGATGGTCTTGCCAGT 2176282 Query 195117 CAAAGTTTTTACGAACACTTGCATTTATGGTTAC 195150 | || || ||||| | |||||| | ||| ||| Sbjct 2176283 GAGGGTCTTCACGAAAATTTGCATAT-TGGCTAC 2176315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109366129662341