Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq119 87.8 3e-12 >seq119 Length=24197627 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878 ||||||||| || ||| | || || ||||||||||| || || || || || || || Sbjct 4461847 TAAAATGCAGATCTTTGTGAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAGCC 4461788 Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 ||| |||| ||| || ||||| || || || ||||| || || || || ||||| Sbjct 4461787 TTCCGATACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGA 4461728 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 || || | |||| | ||||| ||||||||||| ||| | ||| | || || || Sbjct 4461727 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACTCTTTCTGACTA 4461668 Query 155999 TAATATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || || ||| |||| ||||| || || Sbjct 4461667 CAACATCCAGAAGGAGTCGACCCTTCACTTGGT 4461635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731797687546800