Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq104 98.7 3e-15 >seq104 Length=21139217 Score = 98.7 bits (108), Expect = 3e-15 Identities = 109/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 443716 TCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGG 443775 |||| ||||| | || || || | || || ||||||||| || ||||| || |||||| Sbjct 9083546 TCGCCTTTGCCGCCGTGGAGGGCATCTTTTTCAGCGGCAGC-TTCGCCTCTATTTTCTGG 9083604 Query 443776 TTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGAC 443835 | || ||||| || ||||||| || |||||||| ||||| || ||| ||| ||| Sbjct 9083605 CTTAAGAAGCGCGGTCTTATGCCTGGACTGACCTTCTCCAACGAGCTTATCTCTCGCGAC 9083664 Query 443836 GAGGGTTTGCATTGCGACTTCGCC 443859 ||||| ||||| |||||||| ||| Sbjct 9083665 GAGGGCTTGCACTGCGACTTTGCC 9083688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588170692441735