Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27]
8,123 sequences; 165,709,965 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq61 187 2e-42
seq119 167 2e-36
seq5 150 2e-31
seq1 150 2e-31
seq67 140 3e-28
>seq61
Length=22324452
Score = 187 bits (206), Expect = 2e-42
Identities = 214/288 (74%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 135476 TGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCATG 135535
|||||| |||| |||| |||||| ||| || || ||||||||||| ||| |||| |||
Sbjct 16380794 TGGAACTCGGCGCAACTGCAGCTGGTGCGCGAGGGAAAAATGCACGGCTTTTTGCGGATG 16380853
Query 135536 TATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACGCA 135595
|| ||||| |||||||| |||||||| ||||| | || | |||||| | | ||||
Sbjct 16380854 TACTGGGCCAAAAAGATTCTGGAATGGACTGCAACCCCAGAGGAGGCGTTGGAGTACGCG 16380913
Query 135596 ATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTTGT 135655
|| | | || || | |||||| | |||||||||||| | || ||||| || || ||
Sbjct 16380914 ATCCTGCTGAACGACAAATACAGTCTGGATGGACGCGATCCCAACGGCTATGTGGGCTGC 16380973
Query 135656 ATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCAAG 135715
|||||||| ||| |||| || || ||| || ||||||||||| | || ||||||
Sbjct 16380974 ATGTGGTCAATTGGCGGCGTCCATGATATGGGTTGGAAGGAGCGGGCTATTTTCGGCAAG 16381033
Query 135716 ATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAAT 135763
|||| || ||||||||| | || || | | | ||||| ||||||||
Sbjct 16381034 GTTCGGTACATGAACTATCAGGGATGCAAACGCAAATTCGATGTAAAT 16381081
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || |||||||| || ||||||||
Sbjct 13090474 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 13090533
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || ||||| ||||||||||| || || || |||||
Sbjct 13090534 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 13090593
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || ||||||| | ||| | || || || |||
Sbjct 13090594 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 13090653
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || | || ||||| |||| |||| |||||
Sbjct 13090654 ATTCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGCCTGCGTGGTGG 13090700
>seq119
Length=24197627
Score = 167 bits (184), Expect = 2e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||| ||| | || || || ||||| || || ||
Sbjct 4460836 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCTTCA 4460777
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4460776 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4460717
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||||||| | ||| | ||||||||||||
Sbjct 4460716 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 4460657
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4460656 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4460607
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || || ||||| || || ||
Sbjct 4459349 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCTTCA 4459290
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4459289 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4459230
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||||||| | ||| | ||||||||||||
Sbjct 4459229 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 4459170
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4459169 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4459120
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||| ||| | || ||| | || || || |||||
Sbjct 4460012 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATCACTTTGGAGGTTGAGCCGTCG 4459953
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || ||||| || || || || || || || |||||
Sbjct 4459952 GACACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 4459893
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||||||| | ||| | ||||||||||||
Sbjct 4459892 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 4459833
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4459832 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4459783
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || || ||||| || || ||
Sbjct 4461064 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCTTCA 4461005
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4461004 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4460945
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||||||| | ||| | ||||||||||||
Sbjct 4460944 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 4460885
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4460884 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4460835
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||| ||| | || || || ||||| || |||||
Sbjct 4459784 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCGTCG 4459725
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || |||||||| || || || || || || |||||
Sbjct 4459724 GACACCATTGAGAATGTGAAGGCTAAGATTCAAGATAAGGAGGGAATCCCCCCAGATCAG 4459665
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| ||||||| | ||| | || || ||||||
Sbjct 4459664 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGACGCACCCTGTCTGACTACAAC 4459605
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4459604 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4459555
Score = 154 bits (170), Expect = 1e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||| ||| | || || || ||||| || || ||
Sbjct 4460608 ATGCAGATCTTCGTGAAGACTCTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCATCA 4460549
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4460548 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4460489
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||||||| | ||| | ||||||||||||
Sbjct 4460488 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 4460429
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || |||||||||||| | || ||||||
Sbjct 4460428 ATCCAGAAGGAGTCGACCCTTCACTTGGTT 4460399
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || || ||||| || || ||
Sbjct 4459121 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCATCA 4459062
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4459061 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4459002
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||||||||| | || || | || |||| || ||||||
Sbjct 4459001 CAGCGTCTGATCTTCGCCGGCAAACAGCTCGAGGATGGACGCACTCTTTCTGACTACAAC 4458942
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4458941 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4458892
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || || ||||| || || ||
Sbjct 4461292 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCTTCA 4461233
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4461232 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4461173
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | || || | || |||| || ||||||
Sbjct 4461172 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACTCTTTCTGACTACAAC 4461113
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4461112 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4461063
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || || ||||| || || ||
Sbjct 4461615 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCTTCA 4461556
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4461555 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4461496
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | || || | || |||| || ||||||
Sbjct 4461495 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACTCTTTCTGACTACAAC 4461436
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4461435 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4461386
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || || ||||| || || ||
Sbjct 4458893 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCTTCA 4458834
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || || || || || |||||
Sbjct 4458833 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAG 4458774
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||||||||| | || || | || |||| |||||||||
Sbjct 4458773 CAGCGTCTGATCTTCGCCGGCAAACAGCTAGAGGATGGACGCACTCTTTCTGATTACAAC 4458714
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || || || ||||| | ||| | || || || ||
Sbjct 4458713 ATCCAGAAGGAGTCAACTTTGCACTTGGTGCTCCGTCTCCGCGGAGGAAT 4458664
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || ||| | || ||||| || |||
Sbjct 4461843 ATGCAGATCTTTGTGAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTGGAGCCTTCC 4461784
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || || || ||||| || || || || || || || |||||
Sbjct 4461783 GATACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 4461724
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | || || | || |||| || ||||||
Sbjct 4461723 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACTCTTTCTGACTACAAC 4461664
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||||| | ||| |||| ||||| ||
Sbjct 4461663 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTAT 4461614
Score = 118 bits (130), Expect = 9e-22
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134
|| |||||||| || || || || || ||||| |||||| | || | ||||||||| |||
Sbjct 4460381 ATCCAAGACAAGGAGGGAATTCCTCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAA 4460322
Query 27135 TTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTG 27194
|||||||| | ||| | |||||||||||||| || |||||||||||| | || |||
Sbjct 4460321 CTGGAAGACGGACGCACCCTGTCCGATTACAACATCCAGAAGGAGTCGACCCTTCACTTG 4460262
Query 27195 GTTTTGCGTTTGCGGGGTGGCAT 27217
||| | ||| |||| ||||| ||
Sbjct 4460261 GTTCTCCGTCTGCGTGGTGGTAT 4460239
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || |||||||| || || || || || ||||| |||||| | || | |||||||||
Sbjct 4459493 AAGATCCAAGACAAGGAGGGAATTCCTCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAG 4459434
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || || | || |||| || |||||||| || |||||||||||| | ||
Sbjct 4459433 CAGCTCGAGGATGGACGCACTCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTTCAC 4459374
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| | ||| |||| ||||| ||
Sbjct 4459373 TTGGTTCTCCGTCTGCGTGGTGGTAT 4459348
>seq5
Length=900
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||||||||||||| | || || | || || || || ||
Sbjct 165 CATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCTTGGAGGTTGAGCCATC 224
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || || || || || |||||
Sbjct 225 CGATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 284
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||||| || | |||||| || || |||||||| | ||| | ||||| |||||
Sbjct 285 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAA 344
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || ||||| ||||| |||| ||||||||
Sbjct 345 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGCGTCTGCGTGGTGGCAT 395
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||||||||||||| | || || | || || || || ||
Sbjct 393 CATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCTTGGAGGTTGAGCCATC 452
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || || || || || |||||
Sbjct 453 CGATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 512
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||||| || | |||||| || || |||||||| | ||| | ||||| |||||
Sbjct 513 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAA 572
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || ||||| ||||| |||| ||||||||
Sbjct 573 CATCCAGAAGGAGTCCACCCTCCACTTGGTCCTGCGTCTGCGTGGTGGCAT 623
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||||||||||||| | || || | || || || || ||
Sbjct 621 CATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCTTGGAGGTTGAGCCATC 680
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || || || || || |||||
Sbjct 681 CGATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 740
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||||| || | |||||| || || |||||||| | ||| | ||||| |||||
Sbjct 741 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAA 800
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || ||||| ||||| |||| ||||||||
Sbjct 801 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGCGTCTGCGTGGTGGCAT 851
>seq1
Length=21770863
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||||||||||||| | || || | || || || || ||
Sbjct 2176079 CATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCTTGGAGGTTGAGCCATC 2176020
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || || || || || |||||
Sbjct 2176019 CGATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 2175960
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||||| || | |||||| || || |||||||| | ||| | ||||| |||||
Sbjct 2175959 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAA 2175900
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || ||||| ||||| |||| ||||||||
Sbjct 2175899 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGCGTCTGCGTGGTGGCAT 2175849
Score = 147 bits (162), Expect = 2e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||||||||||||| | || || | || || || || ||
Sbjct 2175851 CATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCTTGGAGGTTGAGCCATC 2175792
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || ||||| || || || || || |||||
Sbjct 2175791 CGATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 2175732
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||||| || | |||||| || || |||||||| | ||| | ||||| |||||
Sbjct 2175731 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAAGACGGACGCACCCTGTCCGACTACAA 2175672
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || |||||||| ||| | || ||||| ||||| |||| ||||||
Sbjct 2175671 CATCCAGAAGGAGTCCACCCTCCACTTGGTCCTGCGTCTGCGTGGTGGC 2175623
>seq67
Length=2158
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || |||||||| || ||||||||
Sbjct 941 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 1000
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || ||||| ||||||||||| || || || |||||
Sbjct 1001 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 1060
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || ||||||| | ||| | || || || |||
Sbjct 1061 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 1120
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || | || ||||| |||| |||| |||||
Sbjct 1121 ATTCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGCCTGCGTGGTGG 1167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434874239472960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |