Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20yakuba_20[refseq_20GCF_5F000005975.2_202006-06-27] 8,123 sequences; 165,709,965 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq119 93.3 3e-14 >seq119 Length=24197627 Score = 93.3 bits (102), Expect = 3e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 103377 GTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCGTTTCGCCGGT 103436 |||||||||||| || | ||| | | | || |||| ||||||||| | ||| Sbjct 11133938 GTTGCCCAAATCCCCCAAGTGGCGGTTGTCATCGACGGGAGCGCCGTGCTCCTTGCCATA 11133997 Query 103437 GGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTGCAC 103496 |||||| || || |||| |||| ||||||||||| | ||||||| ||||||||||| Sbjct 11133998 GGGATTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGTTGTCGCCGAACTCGTGCAC 11134057 Query 103497 GTGAAAACCGTGCAATCCTTTGGGCA 103522 ||| || ||||||| || |||| || Sbjct 11134058 GTGGAATCCGTGCAGACCCTTGGCCA 11134083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409620243964857