Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value SEQ78411 140 3e-28 seq315787 109 6e-19 >SEQ78411 Length=2203 Score = 140 bits (154), Expect = 3e-28 Identities = 277/410 (68%), Gaps = 0/410 (0%) Strand=Plus/Minus Query 16984 TCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTT 17043 ||||||||| | ||| || ||||| || || |||| ||||||||| || || || Sbjct 1917 TCCCTCGTCGCGCGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCCCCGCTT 1858 Query 17044 CTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAA 17103 ||| | ||| || || | ||| || ||||| || ||||| || ||||||||| ||||| Sbjct 1857 CTTAAGCCAGAAGATGGAGGCAAAGGACCCCGAGAAGAAGATGCCCTCGACGACGGCAAA 1798 Query 17104 CGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTC 17163 || | | || ||||| | |||| || | || | ||||| | || |||||| Sbjct 1797 GGCCACCAGCCGCTCGGCAAAGGTCGACTCCTCGTCCTGGATCCAGCGCAGCGCCCACTG 1738 Query 17164 GGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTG 17223 || || |||| ||||| || || || ||||| || || | ||| |||| Sbjct 1737 CGCCTTCTGCTGGATGCACGGGATGGTCTCGATGGCGTTGAAGAGAAACTCGGACTCCTT 1678 Query 17224 TAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCAT 17283 |||| | || || || ||||| || || ||| | ||| ||| ||||||||||| Sbjct 1677 GGGGTCCTTGATGTAGGTGTCGATCAGCAGCGAGTAGGTCTCGCTGTGGATGTTCTCCAT 1618 Query 17284 GGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCG 17343 ||||| || ||||| ||||| ||| || | || || || || | |||| || Sbjct 1617 CATGATCTGGAACCCGTAGAAGCACTTGGCCTCGGGGATCTGCACCTCGGCAGAGAACCG 1558 Query 17344 TTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393 ||| | || || ||||||||||| ||||| || ||||| ||||||| Sbjct 1557 CTCCACCAGGTTCTCGTTCACGATCCCGTCAGAGGCAGCGAAGAACGCCA 1508 >seq315787 Length=5980 Score = 109 bits (120), Expect = 6e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 || || |||||||| ||||||||||| || |||||||| ||||| || || ||||| || Sbjct 1395 TAAGTGTCGATGAGCAGGCTGTACATCTCTGAGTGTATATTCTCGATAGCAATCTGGAAG 1454 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356 ||||| ||||| || || |||| || || || ||| | |||||| ||| | | ||| Sbjct 1455 CCGTAGAAGCAGCGAGCCTCCGTTACCTGCACCTCCTGGCTGAATCGCTCCACCAAGTTT 1514 Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAA 17409 || ||||| ||||| || || ||||| || |||| | ||||| || || Sbjct 1515 TCATTCACAATGCCATCTGATGCTGCGAAGAATGCCAGCACGTGCTTGATAAA 1567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515235483459840