Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_001335.1 Length=52297 Score E Sequences producing significant alignments: (Bits) Value seq103768 452 1e-122 seq311842 233 6e-57 seq353213 82.4 3e-11 >seq103768 Length=2474 Score = 452 bits (500), Expect = 1e-122 Identities = 407/514 (79%), Gaps = 12/514 (2%) Strand=Plus/Plus Query 4582 TGACCTTCACAGTCACCCGCGAGAGAGCGCAGTGGGTCCACGACATGGCCCGCGCTCGCG 4641 |||| ||||| |||||||| || | |||||| ||||||||| |||||||||| ||| Sbjct 1389 TGACGTTCACGGTCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCA 1448 Query 4642 ACGGTCTCCCCTACGCGTACGGCGGGGCGTTCACCAACAACCCGAGGGTGTCGACTGACT 4701 | || || |||||||| ||||| || ||||||||| | ||||| | |||||||| || | Sbjct 1449 AGGGCCTGCCCTACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATT 1508 Query 4702 GCTCTGGCCTGGTGCTGCAGACCGGGGCTTGGTATGGAGGTCGCACCGACTGGGTCGGAA 4761 |||| ||||||||||||||||||| ||| ||||| | || |||||||||||| ||||| Sbjct 1509 GCTCCGGCCTGGTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAA 1568 Query 4762 ACCGTTACGGCTCAACCGAATCGTTCCGGCTCGACCACAAGATCGTCTACGACCTAGGGT 4821 |||| |||||| |||||||||||||| || ||| || |||||||||||||||| |||| Sbjct 1569 ACCGCTACGGCAGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGT 1628 Query 4822 TCAAGCGGATGCCCCGAGGCGGGCCAGCGGCCTTGCCGATCAAGCCGGTGATGCTCGTCG 4881 ||||||| |||| ||||||| || || ||||| ||||||||||||||||||||| Sbjct 1629 TCAAGCGCCTGCCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCG 1688 Query 4882 GGCTCCAGCACGGAGGCGGCGGGGTCTACTCGCACACCGCTTGCACGTTGATGACGATGG 4941 |||| |||||||| |||||||| ||| |||||||||| || |||||| | |||||||||| Sbjct 1689 GGCTGCAGCACGGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGG 1748 Query 4942 ACCACCCCGGTGGCCCGGTCAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGCA 5001 || ||||| || |||||| ||| | || ||||||||||||||||||| ||| Sbjct 1749 ACGTTCCCGGCGGGCCGGTCGTCGAGTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGTG 1808 Query 5002 ACCGCAACGGCGTAGGCGTCGAACTTTACGAGGGCGCACGGGCATGGAACGACCCTCTGT 5061 || ||||| | || ||||| ||||| || || |||||||| || |||| Sbjct 1809 AC------------GGCGTGTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGT 1856 Query 5062 TCCATGACTTTTGGTACCTGGACGCAGTCCTCGA 5095 |||| ||||| |||||||| ||||| || ||||| Sbjct 1857 TCCACGACTTCTGGTACCTCGACGCGGTTCTCGA 1890 >seq311842 Length=41669 Score = 233 bits (258), Expect = 6e-57 Identities = 324/447 (72%), Gaps = 20/447 (4%) Strand=Plus/Plus Query 4650 CCCTACGCGTACGGCGGGGCGTTCACCAACAACCCGAGGGTGTCGACTGACTGCTCTGGC 4709 || ||||| | ||| || ||||||| | | |||||| | || || |||||||| || Sbjct 34349 CCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGCTCCACCGACTGCTCCGGG 34408 Query 4710 CTGGTGCTGCAGACCGGGGCT-TGGT-ATGGAGGTCGCACCGACTGGGTCGGAAACCGTT 4767 ||||| |||||||||| || || | |||| | |||||||||||| |||||||| | Sbjct 34409 CTGGTCTTGCAGACCGGCGCGCTGCTGATGG--GCCGCACCGACTGGTCGGGAAACCGCT 34466 Query 4768 ACGGCTCAACCGAATCGTTCCGGCTCGACCACAAGATCGTCTACGACCTAGGGTTCAAGC 4827 |||||||||| ||||||||||| || || || ||| |||| |||| | || ||||||| Sbjct 34467 ACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTCGACATCGGATTCAAGC 34526 Query 4828 GGATGCCCCGAGGCGGG---CCAGCG----GCCTTGCCGATCAAGCCGGTGATGCTCGTC 4880 | | ||| ||||| | |||| | |||| |||| | ||||||||| Sbjct 34527 GCCTTCCCGCCAGCGGGGTCCAAGCGCTGGGTTTTGC-------GCCGATCATGCTCGTC 34579 Query 4881 GGGCTCCAGCACGGAGGCGGCGGGGTCTACTCGCACACCGCTTGCACGTTGATG-ACGAT 4939 || || |||||||| |||||||| | ||| |||||||| ||||| || | ||| Sbjct 34580 GGACTGCAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTGTTCTACGCC 34639 Query 4940 GGACCACCCCGGTGGCCCGGTCAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGG 4999 | || || || || | |||| ||| | || || ||||||||||| |||||| Sbjct 34640 G-ACGTTCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGAGAGCCACGG 34698 Query 5000 CAACCGCAACGGCGTAGGCGTCGAACTTTACGAGGGCGCACGGGCATGGAACGACCCTCT 5059 |||||||||||||| || ||||| ||||| ||| || || ||||||||||| || Sbjct 34699 AAACCGCAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAACGACCCGCT 34758 Query 5060 GTTCCATGACTTTTGGTACCTGGACGC 5086 |||||| ||||| |||||||||||||| Sbjct 34759 GTTCCAAGACTTCTGGTACCTGGACGC 34785 >seq353213 Length=1209 Score = 82.4 bits (90), Expect = 3e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4356 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTG 4413 ||||||||||||| |||||||||||||||||| |||| |||| ||||||||| ||||| Sbjct 447 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166519679651904