Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq237555 136 3e-28 seq182222 136 3e-28 seq157061 114 1e-21 SEQ98807 105 5e-19 >seq237555 Length=1947 Score = 136 bits (150), Expect = 3e-28 Identities = 191/267 (72%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 2694 TTTATTACGGTTCATATCCAAATAATCAGCCCACCACTGCATCATTAAACGCCGCTCATC 2753 ||| | ||| ||| ||||| |||||| ||||||||||||| ||| | | || ||| | Sbjct 1167 TTTCTCACGATTCGCATCCAGATAATCCGCCCACCACTGCAGCATCAGTCTCCTCTCCCC 1108 Query 2754 CAAATGCTCGGAGGTATGGATATATGCCGCACGTACATTATTACGCTCTGAGTGGCTCAG 2813 || ||| || | ||||||| || || || |||||| | ||||||| ||| |||| Sbjct 1107 CAGATGTTCCGCCTTATGGATGTAAGCTGCCCGTACAGAACTACGCTCCTGGTGACTCAT 1048 Query 2814 TTGCCTCTCTATCGCGTCATCACTC---CATAACCCCGACTCCCCCAACGCACCACGCGC 2870 |||| ||| | || ||| ||| || || || || || | | || || ||| Sbjct 1047 CTGCCGCTCCACTGC---ATCCCTCGACCACAATCCTGATTCAATAAGTGAACTACACGC 991 Query 2871 CATAGTCCTAAACCCATGCCCACACACCTCGGTTTTAGTATCATAGCCCATCGCACGCAA 2930 ||| ||||| || ||||||||||| || || ||||| || ||||||||||| | ||||| Sbjct 990 CATTGTCCTGAAACCATGCCCACAGACTTCCGTTTTGGTGTCATAGCCCATATCTCGCAA 931 Query 2931 TGCGCTGTTTACCGTGTTTTCACTCAT 2957 | |||| |||||||| ||||||| Sbjct 930 AACCTTGTTCACCGTGTTCGCACTCAT 904 >seq182222 Length=1109 Score = 136 bits (150), Expect = 3e-28 Identities = 449/688 (65%), Gaps = 44/688 (6%) Strand=Plus/Minus Query 6269 AGCGCCACCATCACCGTTTCACCGGTCAGGTGATGTACGGTAAGTGCGGTCGCGTATCCC 6328 |||||||| ||||||||||||||||||| |||| ||||| || |||| || || || Sbjct 869 AGCGCCACGCACACCGTTTCACCGGTCAGGCGATGCACGGTGAGGCCGGTGGCATAACCT 810 Query 6329 TCCGCTATCCACAGA----CGTTTTCCGGCCTGATTCTGTCCTTCAAGGGTGTGACAGGT 6384 || | | ||| | | |||| ||||||| ||| |||||||| |||| Sbjct 809 TCGGTGAGCCAGATAACCGCGTTGTCCGGCC---CACTG-------AGGGTGTGGCAGGC 760 Query 6385 GCCCCTGACCTGTCCGCCTTTCAGGGTGCGCTTACGGCCGTCAGCACTGATTAACTGAAG 6444 | | ||||| |||||| ||| ||||||| ||| || | || | ||| | Sbjct 759 AGCTTTCACCTGCCCGCCTGCCAGCATGCGCTTGTCCCCGCTGGCGTTAATCAGCTGCAC 700 Query 6445 GTTAACCAGTTCGCCGCTGTCGTCATACAGTGGCACCACAAGGTCACCGGCGCGCCAGCT 6504 |||||||| |||||| | | | | | ||| |||| || ||||| |||| | | || | Sbjct 699 GTTAACCACTTCGCCCCCGGCATTGTGCAGCGGCAACAGCAGGTCGCCGGGGTGGTAGGT 640 Query 6505 CACGCCACCG--GCTCTGTGTGT-GCCGGTCAGCATCCGGCATTCCCGGCCGGGAAAGCC 6561 | || ||| || | | | | |||| ||| || || ||| | || |||| Sbjct 639 GATACCGCCGACGCGCAGCGGCTGGCCGTGCAGGGTCAGGGTGTCCACCTCCGGCCAGCC 580 Query 6562 CTTGCGGGTCAGGTAGGCGTTACCGGT-TCCGGTACGGGTTTTCGCCATCAGGGTTTGTG 6620 ||| | |||| ||||| || ||||| | ||| | | |||| || | |||| Sbjct 579 TTTGGCGCTCAGATAGGCATTGCCGGTCTGAGGT-TGCGCGGCAGCCACCAAAGCCTGTG 521 Query 6621 CCAGTGCGGCGGCGTTCTTCCGGGCAGCGTCTGTTTCATCAACGGCGGCGGTCGTCACTG 6680 | || |||| || | | || || || | || | | || | | | | | Sbjct 520 CTTGTCGCACGGCCTTGCGCTGCGCCTCGGCTTTGTCTT-----GTGGTGAATGAC-CGG 467 Query 6681 CCGGGTCAGCCGGTGGC-AGGC---TG--------CCGGTCACGGCAGCCACCTTTGCGG 6728 || | ||||||||| |||| || || ||||||||||||||| | ||| Sbjct 466 CCTCAGCGGCCGGTGGCAAGGCGTTTGCGTTTTCTCCTATCACGGCAGCCACCTGTTCGG 407 Query 6729 CCGCGTCGGACGGGGAAACACCAAAA--ACCTTTTCAACCAGTTTCAGGCCGTCACCGGC 6786 | ||| | |||| | ||| | | |||||||| ||||| || ||||| || ||||| Sbjct 406 CGGCG--GCCCGGGCAGACAGTGACAGGACCTTTTCCACCAGGTTGAGGCCATCCCCGGC 349 Query 6787 ACCACACTGATTGCAGTACCAGGTGCCGCGCCCCTCCCTGTCATCAAAACGGAAGCGGTC 6846 || |||||||||||| ||||||||||||| || ||| || || |||||||||||||| Sbjct 348 CCCGCACTGATTGCAGAACCAGGTGCCGCGTCCGTCCTGGTTGTCGAAACGGAAGCGGTC 289 Query 6847 ACTCCCGCCACAGACCGGACAGGGCT---GATGACGGTTCTTCAGCACCTGAATCCCCAG 6903 | ||||| ||| ||| || |||| | | | |||| | ||| || || || Sbjct 288 TTTACCGCCGCAGGTCGGGCACGGCTGCGGCTTGCCGTTCGGCTGCAAGCCGATGCCGAG 229 Query 6904 CGCCGGGAGAATACGCGGCCAGTGGCCG 6931 |||||||| || ||||||||||||| Sbjct 228 GGCCGGGAGTATCACCGGCCAGTGGCCG 201 >seq157061 Length=1835 Score = 114 bits (126), Expect = 1e-21 Identities = 100/123 (81%), Gaps = 1/123 (1%) Strand=Plus/Minus Query 8385 TAGCAAATAAC-GCTATCGCCGGAGTTCTCACGCTCGATGGCGATAGCCCAGACGGGGGT 8443 |||| ||||| |||| | ||||||||| || ||| |||| | |||||||||||||||| Sbjct 1830 TAGCTGATAACAGCTACCACCGGAGTTCCTACACTCAATGGTGGTAGCCCAGACGGGGGT 1771 Query 8444 GAGAATACCGGCTTCACAGGATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCAT 8503 ||||||||| | | | ||||||||||||| |||||||||||||||||| ||||| Sbjct 1770 AGGAATACCGGTAACTATGTAAACCGGCCAGCCCGAAGGCTGCCCCGCCTGAGCCACCAT 1711 Query 8504 TGA 8506 ||| Sbjct 1710 TGA 1708 Score = 82.4 bits (90), Expect = 6e-12 Identities = 72/88 (82%), Gaps = 4/88 (5%) Strand=Plus/Minus Query 8606 TGCGACACaaaaaaaGACGCGTGGCGCGTCATATGTCGCCT--GTGAATTGCTCGGGTTC 8663 ||||||| ||||||| ||||||||||||| | ||||||| || || | ||||||| Sbjct 1653 TGCGACATAAAAAAACACGCGTGGCGCGTGTTGTGTCGCCATAGTTAAA--CACGGGTTC 1596 Query 8664 TCACGCCCGGCTGCCGATTTTGCGGCAG 8691 ||||||||| |||||||||||||||| Sbjct 1595 CTACGCCCGGCGGCCGATTTTGCGGCAG 1568 >SEQ98807 Length=4709 Score = 105 bits (116), Expect = 5e-19 Identities = 92/112 (82%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 8396 GCTATCGCCGGAGTTCTCACGCTCGATGGCGATAGCCCAGACGGGGGTGAGAATACCGGC 8455 |||| | ||| ||||| || || || | |||||||||||||||| |||||||||| Sbjct 4692 GCTACCACCGAAGTTCCTACACTTATGGGTGGTAGCCCAGACGGGGGTAGGAATACCGGC 4633 Query 8456 -TTCACAGGATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCATTGA 8506 |||| ||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct 4632 CTTCAAGGGA-ACCGGCCAGCCCGAAGGCTGCCCCGCCTGAGCCACCATTGA 4582 Score = 93.3 bits (102), Expect = 3e-15 Identities = 81/98 (83%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 8608 CGACACaaaaaaaGACGCGTGGCGCGTCATATGTCGCCTGTGAATTG-CTCGGGTTCTCA 8666 ||||| ||||||| |||| |||||||| | |||||||| |||| | ||||||||| | Sbjct 4525 CGACATAAAAAAACACGCCTGGCGCGTGTTGTGTCGCCT-TGAAGTAACTCGGGTTCCTA 4467 Query 8667 CGCCCGGCTGCCGATTTTGCGGCAGGCGAAAAACTATA 8704 ||||||||||||||||||||||||| | | |||||| Sbjct 4466 CGCCCGGCTGCCGATTTTGCGGCAGCGGGAGGACTATA 4429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36932634313216