Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value SEQ30190 109 6e-19 seq356527 87.8 2e-12 seq112643 82.4 9e-11 >SEQ30190 Length=43192 Score = 109 bits (120), Expect = 6e-19 Identities = 141/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| | ||||||||| || ||||| || || || ||||| || Sbjct 6916 AAAGTGAGACCTGGCATAATGCCACGCTTCTTGAGCCAGAAGATAGAAGCAAAGCTGCCG 6857 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTG 24305 |||||||| || || || ||||| ||||| |||| | || || ||| | ||| | Sbjct 6856 GAAAAGAAGATGCCCTCCACTGCTGCAAATGCAACTATTCGCTCACCAAACGTGGCAGTC 6797 Query 24306 TCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362 ||||| ||||||| | ||||| || |||||||| || ||||| ||||||||||| Sbjct 6796 TCATGGGAAATCCACTGCAGTGCCCAGTCTGCCTTCTTCTTCACACATGGCATTGTCTCC 6737 Query 24363 ATAGCATTAAAGAG 24376 | ||||| || || Sbjct 6736 ACCGCATTGAACAG 6723 >seq356527 Length=1012 Score = 87.8 bits (96), Expect = 2e-12 Identities = 281/436 (64%), Gaps = 0/436 (0%) Strand=Plus/Minus Query 53954 AACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCAC 54013 |||||||| || | || | | | ||| || || || | ||| ||||||| | |||| Sbjct 441 AACTCGTCGCCGTAGACGTCGGAGAGTCCCGGGCACTCGTGCGGGCACATCAGGGTCCAC 382 Query 54014 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 54073 | |||| |||||||| || ||||| ||||| || || |||| || || | || || Sbjct 381 ACGCCGTTCTCCTTCACGCGCTTCATGAAGAGGTCCGGGGTCCAGAGGGCGACGAAGAGG 322 Query 54074 TCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 54133 || | || | ||||| || || ||||| | |||| ||| | | | Sbjct 321 TCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGGACGTCGATGAAGTCAAAGACG 262 Query 54134 TCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 54193 || | ||||| || |||| ||| | | || | || || || ||||| || ||||| Sbjct 261 TCGTAGTGCCAGGGCTCCAGGTACACCGCGATGGCGCCCGGGCGCTTGTTGCCGCCCTGG 202 Query 54194 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCA 54253 || | ||| | |||||||| || | || | || ||| || | || || ||||| | Sbjct 201 TCGACGTAGCGCGCGGTGTTGTTGAAGACGCGCATCATCGGCAGGATCCCGTTGGAGGTG 142 Query 54254 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATC 54313 || |||||||| | ||| ||| || | || || || || || || || || Sbjct 141 CCGTTGGTCCCCGCGATGTAGGAGCCGGTCGCCCGGATGTTGTGGATGTTGAGCCCGATG 82 Query 54314 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 54373 || || ||| || ||||| | ||||| || | ||| || ||||||||||| || Sbjct 81 CCGCCGGCCGACTTGGAGATCAGCGCGCAGGTCTTCAGCGTGTCGTAGATGCCCTCGATG 22 Query 54374 CTATCATCCATCATGT 54389 || ||| |||||| Sbjct 21 GAGTCCTCCTTCATGT 6 >seq112643 Length=20659 Score = 82.4 bits (90), Expect = 9e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 53759 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 53818 ||||||||||| || || || || |||||||| || | ||| || || || ||| | Sbjct 6511 ATCTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGGACTTGCGG 6570 Query 53819 TTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATC 53878 || ||||||||||| ||||| ||| | || || || || || | ||| || ||||| || Sbjct 6571 TTGCACGCATCCTTGTAAAGCATGTAGGGGGTGCCCGTCTCCACCTGCGACTCTATGATG 6630 Query 53879 GCTTTCCAGA 53888 || | ||||| Sbjct 6631 GCGTACCAGA 6640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591071464266240