Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value SEQ22875 147 2e-30 seq126606 84.2 2e-11 >SEQ22875 Length=3501 Score = 147 bits (162), Expect = 2e-30 Identities = 251/362 (69%), Gaps = 9/362 (2%) Strand=Plus/Minus Query 106216 CCTTTATACGGCTCGTTCCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCAC 106275 || || || || || | ||| |||| || || || || | |||||| | ||||| || Sbjct 3501 CCCTTGTAGGGGTCATCCCAGGCGGTGACGCCCTTCTGCGCTTTTTGCAGCGCGGCGAAC 3442 Query 106276 GGATCGTGAATGGCAACTTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCA 106335 |||||||| |||| ||||||||||| ||||| |||| ||| || | |||| | | Sbjct 3441 GGATCGTGGATGGAGACTTTGAAATCCTCGCGGCCCTGGCAGGAGCGCTGCAGCGCCTGG 3382 Query 106336 AAGCTTCCGGGTATCGTTTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATG 106395 ||||| || ||| ||| ||| |||||| || || | |||||||||||| || || Sbjct 3381 AAGCTGCCTTCAATCTCTTTCAGGCTGTCGTTGATGCCGTTGCCGCCGCAGATCGGGATA 3322 Query 106396 AAACCATACAACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGC 106455 || || |||| || ||| | | || || || | ||||| |||| || |||||| Sbjct 3321 AAGCCGTACAGCAGGTGAGTCAGGTTCTGCGCCGGGATCTTGTCGACGGTGAAATTGCGC 3262 Query 106456 CCGTACACACCCCACTCAACAAAGTACGCAGCGACAATTTT------ATCCTCTCTCCTG 106509 ||||| || |||||||| || || || | | |||| | ||| || || | | | Sbjct 3261 CCGTAAACGCCCCACTCGACGAAATAAGAACCGACCACTTTGCCGGAATTCTGT-TTATA 3203 Query 106510 CCAGGTTTGTTGTTTTCCAGCCATGTGTATTCGAGCGGTGCCAGATGGCCGCCGTCGGTG 106569 | ||||| || ||||||||| | | || | ||| |||| ||||| |||||||||| Sbjct 3202 C--GGTTTATTCTTTTCCAGCAGCGGCTCTTTCAACGGCGCCAAATGGCTGCCGTCGGTG 3145 Query 106570 TC 106571 || Sbjct 3144 TC 3143 >seq126606 Length=1303 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||| || ||||| ||||| || |||||||||||||||||| | ||| || | ||||| Sbjct 1303 TCAGCAGAGACTGATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACTTTGTCAGATTA 1244 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||| ||||| ||||| || |||| |||| ||| | ||||| Sbjct 1243 TAACATCCAGAAAGAATCCACTCTGCATTTGGTCCTACGCTTAAGGGGAGG 1193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426471877444640