Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_001900.1 Length=49136 Score E Sequences producing significant alignments: (Bits) Value seq103768 347 4e-91 seq311842 205 3e-48 seq353213 82.4 2e-11 >seq103768 Length=2474 Score = 347 bits (384), Expect = 4e-91 Identities = 380/506 (75%), Gaps = 12/506 (2%) Strand=Plus/Plus Query 4707 TGACGCTCATAGTCACACGCGACCACGCGCAGTGGGTCCACGACATGTGCCGCGCTCGCG 4766 ||||| ||| ||||| || | | |||||| ||||||||| || |||||| ||| Sbjct 1389 TGACGTTCACGGTCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCA 1448 Query 4767 CTGGCAACAGGTACGGCTACGGCGGGGCGTTCACACTCAACCCCCGAGACACCACCGACT 4826 ||| |||| |||||| || |||||||| | | |||| || | | ||||| | Sbjct 1449 AGGGCCTGCCCTACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATT 1508 Query 4827 GCTCGGGTCTGGTTCTGCAGACGGCAGCCTGGTACGGCGGTCGGAAGGACTGGATCGGAA 4886 |||| || ||||| |||||||| || ||||||||| | || || | |||||| ||||| Sbjct 1509 GCTCCGGCCTGGTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAA 1568 Query 4887 ACCGGTACGGCTCGACTGAGAGCTTCCGGCTCGACCACAAGATCGTCTACGACCTCGGGT 4946 |||| |||||| || || ||||| || ||| || ||||||||||||||||||||| Sbjct 1569 ACCGCTACGGCAGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGT 1628 Query 4947 TCAGGCGACTCCCTCCGGGAGGCGTTGCGGCCCTGGGATTCACCCCGGTCATGCTCGTCG 5006 ||| ||| || || |||| || | || || ||| |||| ||||| |||||||||| Sbjct 1629 TCAAGCGCCTGCCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCG 1688 Query 5007 GGCTCCAGCACGGCGGCGGGGGCCGGTACTCGCACACCGCTTGCACGCTGATGACGATGG 5066 |||| |||||||||||||| || |||||||||| || |||||||| |||||||||| Sbjct 1689 GGCTGCAGCACGGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGG 1748 Query 5067 ACATCCCCGGTGGCCCGGTGAAGGTCTCGCAACGAGGCGTCGACTGGGAGTCCCGAGGAG 5126 || | ||||| || ||||| | ||| || |||||||||||||||||||| || | Sbjct 1749 ACGTTCCCGGCGGGCCGGTCGTCGAGTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGTG 1808 Query 5127 AAGTCAACGGCGTGGGGGTGTTCCTCTACGACGGCGCACGCGCCTGGAACGACCCGCTCT 5186 ||||| |||| || ||||||||||| |||||||||||||| ||||| | Sbjct 1809 ------ACGGC------GTGTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGT 1856 Query 5187 TCCACGACTTCTGGTACCTGGACGCG 5212 ||||||||||||||||||| |||||| Sbjct 1857 TCCACGACTTCTGGTACCTCGACGCG 1882 >seq311842 Length=41669 Score = 205 bits (226), Expect = 3e-48 Identities = 292/406 (72%), Gaps = 4/406 (1%) Strand=Plus/Plus Query 4818 CCACCGACTGCTCGGGTCTGGTTCTGCAGACGGCAGC-CTGGTACGGCGGTCGGAAGGAC 4876 ||||||||||||| || ||||| ||||||| | || ||| | | || || | ||| Sbjct 34392 CCACCGACTGCTCCGGGCTGGTCTTGCAGACCGGCGCGCTGCTGATG-GGCCGCACCGAC 34450 Query 4877 TGGATCGGAAACCGGTACGGCTCGACTGAGAGCTTCCGGCTCGACCACAAGATCGTCTAC 4936 ||| |||||||| |||||||| || || ||||| || || || ||| |||| | Sbjct 34451 TGGTCGGGAAACCGCTACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTC 34510 Query 4937 GACCTCGGGTTCAGGCGACTCCCTCCGGGAGGCGTTGCGGCCCTGGGATTCACCCCGGTC 4996 ||| |||| |||| ||| || || | | || || || ||||| || | ||| || Sbjct 34511 GACATCGGATTCAAGCGCCTTCCCGCCAGCGGGGTCCAAGCGCTGGGTTTTGCGCCGATC 34570 Query 4997 ATGCTCGTCGGGCTCCAGCACGGCGGCGGGGGCCGGTACTCGCACACCGCTTGCACGCTG 5056 ||||||||||| || |||||||||||||| ||| ||| |||||||| ||||| ||| Sbjct 34571 ATGCTCGTCGGACTGCAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTG 34630 Query 5057 ATG-ACGATGGACATCCCCGGTGGCCCGGTGAAGGTCTCGCAACGAGGCGTCGACTGGGA 5115 | ||| | || | || || || | | || ||| || || |||||||||| Sbjct 34631 TTCTACGCCG-ACGTTCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGA 34689 Query 5116 GTCCCGAGGAGAAGTCAACGGCGTGGGGGTGTTCCTCTACGACGGCGCACGCGCCTGGAA 5175 | || ||| | ||||||||| || || | ||||||| ||| ||||||||||| Sbjct 34690 GAGCCACGGAAACCGCAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAA 34749 Query 5176 CGACCCGCTCTTCCACGACTTCTGGTACCTGGACGCGAAGCTTGAA 5221 ||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct 34750 CGACCCGCTGTTCCAAGACTTCTGGTACCTGGACGCCAAGCTCGAA 34795 >seq353213 Length=1209 Score = 82.4 bits (90), Expect = 2e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4339 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTG 4396 ||||||||||||| |||||||||||||||||| |||| |||| ||||||||| ||||| Sbjct 447 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156447372348288