Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq242644 212 2e-50 seq294323 87.8 5e-13 SEQ35189 80.6 7e-11 >seq242644 Length=1344 Score = 212 bits (234), Expect = 2e-50 Identities = 507/753 (67%), Gaps = 24/753 (3%) Strand=Plus/Minus Query 4430 CGTGATCTGCTGGCTCAGGGCCGCACTTCCAGTAACGCTC-TGGAATATGTGCGTGAAGA 4488 |||||| || |||| || |||||||| ||| |||| | | |||| || |||||||| Sbjct 1288 CGTGATTTGATGGCACAAGGCCGCACCTCCCA-AACGACCATTGAATTCGTTCGTGAAGA 1230 Query 4489 GGTGTTTACCAATAACGCCGACGTGGTGGCAGAGAAAGCACTGAAGCCAGAATCGGATAT 4548 ||||| ||||||| ||| | || ||| || ||||| ||| || |||||| |||| Sbjct 1229 CGTGTTCACCAATAGCGCTAAAGTCGTGAAGGAAGGAGCACAGAAACCGGAATCGAATAT 1170 Query 4549 CACCTTCAGCAAAC---AAACCGCGAACGTGAAGACCATCGCGCACTGGGTGCAGG-CAT 4604 ||||||| ||| | | ||| | ||| || ||||||||| | ||| || Sbjct 1169 CACCTTCTCCAAGGCTGATGTCTCGACC---AAGGTTATTGCGCACTGGATCCAGCTCAC 1113 Query 4605 CACGTCAGGTGATGGATGATGCGCCAATGCTTCAGTCCTACATTAACAACCGCCTCATGT 4664 || |||| ||||| || ||||| |||||||| || || | ||| Sbjct 1112 CAAA-CAGGCAGCTTCCGATGCACCTATGCTCCAGTCCTATATCGGTGGACGTTTGCTGT 1054 Query 4665 ACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACC 4724 |||| |||| || || || | ||| | ||||| || ||||||||||| ||||||| Sbjct 1053 ACGGTCTGGGTCTCGTTGAGGATGAGCAGTTCCTGAATGGTGACGGTACCGGCGATAACC 994 Query 4725 TGGAAGGGCTGAACAAAGTGGCAACCGCCTATGACACCTCGCTGAATGCCACCGGCGACA 4784 | | || | |||| || || || ||||| |||||| ||||| ||| || || || | Sbjct 993 TCGTGGGTATCAACACCGTAGCCACTGCCTACGACACCACGCTGGATGTCAAGGGAGATA 934 Query 4785 CCCGCGCTGACATTATCGCTCACGCTATTTATCAGGTGACCGAGTCTGAGTTCAGCGCTT 4844 | | |||| ||||||||||||| | ||||| ||||| ||||||| | ||| Sbjct 933 CTGCAGTGGACAAGCTCGCTCACGCTATCTTCCAGGTTACCGAATCTGAGTACTACGCCA 874 Query 4845 CCGGTATCGTCCTGAACCCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAG 4904 | || ||||| || || || || |||||||||| | || | |||| ||| ||||| Sbjct 873 CTGGCATCGTGCTCAATCCTCGTGACTGGCACACATTGGCACTCATGAAGGACGGTGAAG 814 Query 4905 GCCGCTATATCTTCGGTGGTCCTCAGGC-AT--TCACCAGTAACATCATGTGGGGCTTGC 4961 ||||||| ||| | || || || || || || | || | || | |||||||| ||| Sbjct 813 GCCGCTACATCCTTGGCGGCCCGCAAGCGATCGTTTCCCG---CACCCTGTGGGGCCTGC 757 Query 4962 CAGTGGTTCCGACTAAGGCG---CAGGCCGCCGGCACCTTTACCGTAGGCGGTTTCGATA 5018 | || || ||||| || ||||| | || |||| || |||| ||| | Sbjct 756 CTGTTGT---GACTACCCCGCGTCAGGCGAAGGATACGTTTAGTGTGGGCGCGTTCTCTC 700 Query 5019 TGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAAGTTAGCCG-TGAAGACCGC 5077 ||||||| ||||| ||||||| | ||| | | | | | ||| | | ||||| Sbjct 699 TGGCCTCTCAGGTTTGGGATCAGTGGTCTGCAAGCAT-CACCACATCCGATCAGGACCGT 641 Query 5078 GATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCGCAT 5137 || ||||||||||| |||||||| || || || ||||| ||||| || | || || Sbjct 640 GACAACTTCGTGAAGAACATGCTCACGATTCTCGCGGAAGAACGTCTTGCAATTGCCCAC 581 Query 5138 TATCGCCCGACAGCAATCATCAAGGGCACCTTC 5170 || ||||||| ||| | | || ||||| ||| Sbjct 580 TACCGCCCGAAAGCGCTGGTTAAAGGCACTTTC 548 >seq294323 Length=2603 Score = 87.8 bits (96), Expect = 5e-13 Identities = 106/133 (80%), Gaps = 11/133 (8%) Strand=Plus/Minus Query 37535 CCGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGGGATATGAGACAGAGACAGGA 37594 |||||||||||| ||||| |||| |||||||| ||||||| || ||| |||| ||| Sbjct 2194 CCGCGCATTCTCC-GCGCAAATCA-CCAAGAGCCTTTCGGGGTA-GAGCTTGAGATAGGG 2138 Query 37595 CGGTGGCTTACATCG-TG-CCGCTCTTGGGCTGTCCATGTCTGCGAGAACTGGCTCATAT 37652 | |||| | |||| || |||||||||||||| | | |||| |||||| ||||| ||| Sbjct 2137 CAGTGGTT---ATCGCTGACCGCTCTTGGGCTGCCTACATCTG-GAGAACAGGCTC-TAT 2083 Query 37653 CACCAAAAAGGTA 37665 |||| |||||||| Sbjct 2082 CACC-AAAAGGTA 2071 >SEQ35189 Length=9062 Score = 80.6 bits (88), Expect = 7e-11 Identities = 185/278 (67%), Gaps = 8/278 (3%) Strand=Plus/Plus Query 19708 CAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCTGTTCCGTGGCCTT 19767 ||||| | || |||| || || || || | |||||||| || ||||| ||||||||| Sbjct 7484 CAAACTTAGGCCTGGGCGATGGTTCGGCTCTTCCTGTTGGGGTGCCTGTGCCGTGGCCTC 7543 Query 19768 CCGCCACTCCGCCAACAGGCTGGCTGAAATGCAACGGTGCGGTTTTTTCTGCTGAAGAAT 19827 || || || || || || |||||||||| ||| || | | |||| | |||| | Sbjct 7544 TTGCTACGCCTCCTACTGGATGGCTGAAATACAATGGGTCTGCTTTTGAT----AAGACT 7599 Query 19828 ----ACCCGGAACTGGCAAAGGCTTATCCAACAAATAAATTGCCTGATTTACGTGGTGAG 19883 | || |||||||| | |||| | | | ||||| || | || || | Sbjct 7600 CTCTATCCAAAACTGGCAGCTGTTTATACCTCCGGTGTTTTGCCAGACCTTCGCGGCTAT 7659 Query 19884 TTTATTCGTGGTTGGGATGACGGGCGCGGTATTGACGCGGGGCGCGAAATTCTGTCTGCT 19943 ||||| || | | ||||| || ||||| |||||| | || | | |||| || | Sbjct 7660 TTTATCCGCGCATTCGATGATGGACGCGGCATTGACTCCGGCAGGGTTCTTCTCTCAACG 7719 Query 19944 CAGGGGGATGCTATTCGTAATATAACCGGCACATTTGG 19981 || | ||||||||||||||||| | ||||| |||| Sbjct 7720 CAAAGCGATGCTATTCGTAATATTATTGGCACCATTGG 7757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126482178459264