Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq111484 412 9e-111 seq342966 105 2e-18 seq341626 95.1 3e-15 seq127745 84.2 6e-12 SEQ70014 84.2 6e-12 >seq111484 Length=2433 Score = 412 bits (456), Expect = 9e-111 Identities = 719/1039 (69%), Gaps = 29/1039 (3%) Strand=Plus/Minus Query 8909 TAATGATTACATTCACTCCAACACGCAACATCGACCTGATAGAAATGGTTGGCAACCACC 8968 |||||||| |||| ||||| || || |||||||| || ||| || |||||||| | Sbjct 1254 TAATGATTGAGTTCAAACCAACGCGAAATATCGACCTTATTGAAGCCGTGGGCAACCATC 1195 Query 8969 CCGACATCATTGCCGGAAGCAACAACGGTGACGGATACGACTA-CAAGCCTGAGTGTCGT 9027 |||||||||| || || || ||||| |||||||||| ||| || ||| || || |||| Sbjct 1194 CCGACATCATCGCTGGTAGTAACAATGGTGACGGATTCGATTATCAACCCGGACA-TCGT 1136 Query 9028 TACTTTGAAGTGAACGTACATGGTCAGTTCGGTGGCATCGTGTATTACAACGAGATTCAG 9087 || || || ||| | || ||||| |||||||| |||||| | || | | |||| || ||| Sbjct 1135 TATTTCGAGGTGCATGTGCATGGCCAGTTCGGCGGCATCATCTACTTCCACGAAATCCAG 1076 Query 9088 CCGATGACCTTTGACTGCCACGCCATGTACCTGCCTGAGATTCGCGGATTCAGTAAGGAA 9147 || |||||||| ||||||||||| ||||| ||| ||| | ||||||||||| || || Sbjct 1075 CCCATGACCTTCGACTGCCACGCAATGTATCTGAAAGAGGTGCGCGGATTCAGCCAGAAA 1016 Query 9148 ATCGGACTGGCGTTCTGGCGATATATTCTCACCAATACCACCGTTCAGTGCGTTACATCA 9207 ||||| |||| |||||||||| || || | || || ||| || |||||||| ||| Sbjct 1015 ATCGGGTTGGCATTCTGGCGATTCATCCTGGCTAACTTCAACGTGCAATGCGTTACCTCA 956 Query 9208 TTTGCTGCACGCAAATTTCGCCACGGTCAGATGTACTGCGCAATGATTGGCCTTAAGCGT 9267 || || || |||||||| || || |||||||| |||||| | ||| | || || ||||| Sbjct 955 TTCGCCGCGCGCAAATTCCGGCATGGTCAGATTTACTGCACGATGCTAGGGCTCAAGCGC 896 Query 9268 GTGGGAACCATCAAGAAATACTTCAAAGGCGTAGATGACGTGACGTTTTACGCCGCCACC 9327 || || |||||||||||||||||||||||||| |||||||| || || || |||| || Sbjct 895 GTCGGCACCATCAAGAAATACTTCAAAGGCGTTGATGACGTCACTTTCTATTCCGCTACT 836 Query 9328 CGAGAAGAGTTAACCGAATTACT-GAATA--ACGGGAGATA--AA------CATGTTATA 9376 || |||||| | || || || || ||| | || | ||| || ||||| | Sbjct 835 CGCGAAGAGCTGACGGAGTTCCTGGAACAGCACTCCAAATAGGAATCACGCTATGTTTGA 776 Query 9377 TGCATTT----AC-GCTGGGCAGGAAACTGC--GCGG-TG--AGGAACCTTCTTATCCTG 9426 || ||| || || | ||||||| | |||| || || || | | || | Sbjct 775 TGTTTTTGAAAACAGCCGCTGCGGAAACTCCAAGCGGATGAAAGAAAGC--CGCATGC-- 720 Query 9427 AAAAAGGCGGTAAAGGTGGCGCAGATAAAAGCGCAAAGTATGCAGCAGAAGCGCANNNNN 9486 ||||| || |||||||||| |||| |||| ||||||||| || Sbjct 719 GCAAAGGTGGCAAAGGTGGCGGCAATAACGGCGCTGGCGCTGCAGCAGATGCAACGAAAT 660 Query 9487 NNNNNNNNNNNNNNNNNNNCCAGCAGTTCAATACCATCATGAACAACCTGAAGCCGTTTA 9546 |||||||||| | ||||||| ||| ||| ||| || | Sbjct 659 ACGCCGCCGACCTGCAAAACCAGCAGTTCGAGCGCATCATGGGCAATCTGGCGCCATTCA 600 Query 9547 CTCCTCTGGCAGATAAGTATATCGGCAGTCTTGAAGGTTTATCGTCTCTCGAAGGTCAGG 9606 |||| ||||| | | || |||||| || || | || | |||| || ||| Sbjct 599 CTCCGCTGGCTCAGCAATACATCGGCCAGCTGCAAAACCTCTCCACGCTCGGCGGCCAGC 540 Query 9607 GGCAGGCGCTTAATAATTACTATAACTCCCAACAATACCAGGACCTTGCGGGGCAGGCTC 9666 ||||| || |||| || |||||| |||||| | ||||| || ||||| | Sbjct 539 AATCCGCGCTGAACGATTATTACAACTCCGGCCAATACAAAGACCTCGCCAATCAGGCGC 480 Query 9667 GCTATCAGAATCTGGCAGCGGCAGAAGCAACAGGTGGCCTGGGTTCTACAGCGACCAGTA 9726 | || ||| | |||||| | || ||||| || || || || || || || ||||| | Sbjct 479 GATACCAGCAACTGGCATCAGCGGAAGCGACCGGCGGACTTGGCAGCACCGCTACCAGCA 420 Query 9727 ACCAGCTTTCAGCAATCGCCCCAACACTTGGTCAGCAATGGCTGTCAGGTCAGATGAATA 9786 || | | ||||||| || || || || || | ||||| ||||| |||||||||| Sbjct 419 ACGGATTGGCGACAATCGCTCCTACGCTGGGGCAAAACTGGCTTTCAGGCCAGATGAATA 360 Query 9787 ACTATCAGAACCTTGCAAATATTGGTCTTGGTGCGCTTCAGGGGCAGGCAAACGCCGG-A 9845 |||| |||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || || Sbjct 359 ACTACCAGAACCTGGCAAACATTGGCCTTGGCGCGCTGCAGGGTCAGGCAAATGCTGGCG 300 Query 9846 CAGACATATGCCAACAATATGAGTCAGATTTCACAGCAAAGCGCGGCTCTTGCAGCGGCA 9905 || || | || |||||| ||||| | ||| ||| |||| | || || || || Sbjct 299 CAAAC-TTCGCTAACAATGCTGGTCAGTTGTCAATGCAGGGCGCATCGCTGGCCGCTGCT 241 Query 9906 AATGCCAACAGACCATCAG 9924 || || ||| | ||||||| Sbjct 240 AACGCTAACCGCCCATCAG 222 Score = 141 bits (156), Expect = 2e-29 Identities = 313/466 (67%), Gaps = 5/466 (1%) Strand=Plus/Minus Query 7985 ACTGGTGTTGCTCAATACGCTGACCGCCTGTTCCTGTCTGCAACAACTGACGGCATCAAT 8044 ||||| || |||| | ||||| || || ||| | || ||||| ||| ||| || Sbjct 2426 ACTGGCGTGTCTCAGTGGGCTGAGCGTCTTTTCATTTCAGCAACGGTTGATGGCTCAAAC 2367 Query 8045 TACGGTCGTGAACAGATGATTGAGCAGAACGAGCCGTTTGTGTACGACAAGCGCGTTTTA 8104 ||||| || || || ||| | || | |||| ||| || | ||||||||||||| | || Sbjct 2366 TACGGCCGAGAGCAAATGGTCGATTACAACGCGCCATTCATCTACGACAAGCGCGCTATA 2307 Query 8105 TGGAAACGTGTTGGGCGCATTCGTCGATTAATCGGATTCAAACTGCGAGTAATCACCAAA 8164 ||| |||||||| ||| | | | || || ||||| |||| || || ||| Sbjct 2306 TGGTGTCGTGTTGGCCGCGTCAGGAAAAACATTGGCTTCAAGGTGCGTGTGATTACCCGC 2247 Query 8165 TCACCAGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAAAATATGGCAGACCCGTCA 8224 || ||||| || || || | || | ||| ||| | || ||||| || | Sbjct 2246 TCTCCAGTGACGCTGTCTGACTG-CTCATTGA---GGATTGAATGATGGCCGATGATGGA 2191 Query 8225 CTTAATAATCCTGTCGTTATTCAGGCCACCCGTCTCGACGCTTCAATTCTTCCCCGTAAC 8284 | || | || || | || ||||| || || ||||||| | | || || || ||| Sbjct 2190 TTGAAAGAACCGGTAATCATCCAGGCTACGCGCATCGACGCCACGCTCCTGCCTCGCAAC 2131 Query 8285 GTCTTTAGCAAGTCTTATCTGCTCTATGTAATCGCGCAGGGAACTGACGTTGGTGCTATT 8344 ||||| | || |||||||||| || || || |||||||||||| |||| | Sbjct 2130 ATCTTTTCCCAGCCTTATCTGCTTTACGTTATTCAGCAGGGAACTGATCTTGGAAACGTG 2071 Query 8345 GCAGGAAAGGCAAACGAAGCTGGACAGGGTGCTTATGACGCACAGGTAAAAAATGATGAG 8404 || |||||||||||||| ||||| || || || | || || ||| || ||||||||| Sbjct 2070 GCGGGAAAGGCAAACGAGGCTGGGCAAGGAGCCTGGGATGCGCAGAAGAAGAATGATGAG 2011 Query 8405 CAGGATGTAGAGCTTGCAGACCATGAAGCAAGAATTA-AGCAACTG 8449 ||||| ||| || ||| ||||||| | |||| | |||| ||| Sbjct 2010 CAGGACTTAGTTCTGGCAAACCATGAGACGCGAATAACAGCAGCTG 1965 >seq342966 Length=5486 Score = 105 bits (116), Expect = 2e-18 Identities = 274/410 (67%), Gaps = 12/410 (3%) Strand=Plus/Plus Query 16138 TTGTTTTATCACAAAAAATTCACCGTAGCCATG--CTGCGGCAATTCCTTGCATCTGGAG 16195 || |||||| | ||||| ||||| || | | ||| || ||||| | |||||| Sbjct 969 TTTTTTTATACCTAAAAAC-CACCGCAGGCGCGACCTGTGGGGATTCCACACGCCTGGAG 1027 Query 16196 CAAATTAAATGACAGACATCACTGCAAACGTAGTTGTTTCTAACCCTCGTCCAATCTTCA 16255 |||| ||||| | || ||| | ||||| || || || | ||| | | | |||| Sbjct 1028 AAAAT-AAATGGCCGATATCGTCCCTAACGTTGTCGTCTCGATGCCTTCGCAATTGTTCA 1086 Query 16256 CTGAATCCCGTTCGTTTAAAGCTGTTGCTAATGGGAAAATTTACATTGGTCAGATTGATA 16315 | | | || ||||| ||||||| ||||| || | |||||||| || ||||||||| Sbjct 1087 CGCTAGCTCGCTCGTTCAAAGCTGCAGCTAACGGCAGGATTTACATCGGCAAGATTGATA 1146 Query 16316 CCGATCCGGTTAATCCTGCCAATCAGATACCCGTATACATTGAAAATGAGGATGGCTCTC 16375 | ||||| | || | || ||||| | || || | || || |||||||| || | Sbjct 1147 CTGATCCCACCATCCCGGAGAACCAGATTCAGGTTTATGTGGAGAACGAGGATGGGTCAC 1206 Query 16376 ACGTCCAGATTACTCAGCCGCTAATTATCAACGCAGCCGGTAAAATC--GTATACAACGG 16433 | || | || | |||||| | || || ||||| | ||| | ||| || || ||| Sbjct 1207 ATGTGCCAATGGCACAGCCGATCATGATAAACGCTGGCGG--ATATCCAGTGTATGGCGG 1264 Query 16434 CCAACTGGTGAAAATTGTCACCGTTCAGGGTCATAGCATGGCTATCTATGATGCCAATGG 16493 || | | ||| |||| || || | |||||||||||||| | ||||| || |||| Sbjct 1265 TCAGATTGCCAAATTTGTAACTGTCGAAGGTCATAGCATGGCAGTTTATGACGCATATGG 1324 Query 16494 TTCTCAG--GTTGACTATATTGCTAACGTATTGAAGTACGATCCAGATCA 16541 ||||| ||| |||| | | || |||||||| || || || || || Sbjct 1325 CGCTCAGCAGTT--CTATTATCCAAATGTATTGAAATATGACCCTGACCA 1372 >seq341626 Length=1759 Score = 95.1 bits (104), Expect = 3e-15 Identities = 198/292 (68%), Gaps = 10/292 (3%) Strand=Plus/Minus Query 24188 TCTTTGATATGCAGTCGTGGCTCGCCGTCTTTCGGTTCAGGCCACTGGCGTGTTTTGTTT 24247 || ||||| |||| | || ||||| ||||| || ||||||| || | |||| Sbjct 1353 TCCTTGATGTGCATCCTCGGTTCGCCATCTTTGGGCGCAGGCCATGATCGCGCCATGTTC 1294 Query 24248 ATCTCCAGTTTTTCAATCATCGCCCTCGTAATGAATTCG---TCGGAAATTCCCATGCGC 24304 | || ||| ||||| ||| || | ||||| |||| ||| || || || Sbjct 1293 ACCTTCAGCTTTTCTTCCATGGCT---GCAATGATTTCGCCATCGCTGATGCCTGCACGT 1237 Query 24305 CGCTGGGCATCCCACAATAAAAACTGCATATCAGCCCATTCAAGCGGGTCTGATGGG--T 24362 ||||| |||||||| | | || |||||||||||||||||| | || | || | | Sbjct 1236 CGCTGTGCATCCCAAAGCAGGAATTGCATATCAGCCCATTCAGACAGGCC--ATCGACTT 1179 Query 24363 CGGCAGCGGCTTCCAGCGCTTCTTTCGAAAGATGTTTAAGCGGGCCGACTGGACCAACAT 24422 || |||| ||||| |||||| || || || || ||||| |||| ||| ||||||| Sbjct 1178 TAGCGGCGGTCTCCAGAGCTTCTGCGGACAGGTGCTTTAGCGGTCCGATTGGTCCAACAT 1119 Query 24423 CGCCGAACGTCTTATCTGACCACTCGGCGTGCTCACGGCGAATACGTTCGCG 24474 |||| || || | | |||||||||| | || ||||| || |||||| Sbjct 1118 CGCCAAAGGTTCTTTGTGACCACTCGCCATGGCGCCGGCGGATGATTTCGCG 1067 >seq127745 Length=6234 Score = 84.2 bits (92), Expect = 6e-12 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 6824 GGTAAAGACTTCAAGAACGCCGATTATATCGACTATCTGCCAGTGAATATGCTGGCAACA 6883 || ||||||| | || || ||||| |||| | || || || || |||||||| || Sbjct 5631 GGCAAAGACTACCGTAATGCTGATTACGTCGATTTGCTTCCTGTTAACATGCTGGCGACG 5690 Query 6884 CCCAAAGAAATCCTTAACAGCAGC-GGCTATCTCCGCTCATTCCCTGGCATTACCAAACG 6942 || ||||| | || || ||| | || ||||| || |||||||||||| | | || || Sbjct 5691 CCGAAAGAGGTTCTGAAT-GCATCTGGGTATCTTCGTTCATTCCCTGGCGTAGCGAAGCG 5749 Query 6943 TTATGATATGAACGGCGTATCGCGTGGAGTTGAGTACAACACCGCTCAGAATGCTGTTTA 7002 | || | || || || || || || ||||||||||||||| ||| | ||| || Sbjct 5750 CTCAGACGTTTCTGGAGTGTCTCGCGGTGTGGAGTACAACACCGCTGAGAGCGTTGTCTA 5809 Query 7003 TCGTGTTTGTGGTGGCAAGCTCTAC 7027 ||| ||| || || ||| ||||| Sbjct 5810 TCGCGTTGCGGGAGGGAAGGTCTAC 5834 >SEQ70014 Length=1272 Score = 84.2 bits (92), Expect = 6e-12 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 21293 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 21338 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132829548326016