Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value SEQ30190 114 2e-20 seq315787 102 1e-16 >SEQ30190 Length=43192 Score = 114 bits (126), Expect = 2e-20 Identities = 142/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| | ||||||||| || ||||| || || ||||| || ||| Sbjct 6916 AAAGTGAGACCTGGCATAATGCCACGCTTCTTGAGCCAGAAGATAGAAGCAAAGCTGCCG 6857 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 33752 ||||||||||| || || ||||| ||||| |||| | || ||| ||| | ||| | Sbjct 6856 GAAAAGAAGATGCCCTCCACTGCTGCAAATGCAACTATTCGCTCACCAAACGTGGCAGTC 6797 Query 33753 TCATG---TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809 ||||| ||||||| | ||||| || |||||||| || ||||| ||||| || || Sbjct 6796 TCATGGGAAATCCACTGCAGTGCCCAGTCTGCCTTCTTCTTCACACATGGCATTGTCTCC 6737 Query 33810 ATGGCATTAAAGAG 33823 | ||||| || || Sbjct 6736 ACCGCATTGAACAG 6723 >seq315787 Length=5980 Score = 102 bits (112), Expect = 1e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 33839 ACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 33898 |||||| || || ||||| ||||| | || || ||||| || || || || || || || Sbjct 1382 ACTATCCTTGACGTAAGTGTCGATGAGCAGGCTGTACATCTCTGAGTGTATATTCTCGAT 1441 Query 33899 GGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCG 33958 || ||||| || |||||||| || | |||||| || | |||||| || | ||||| Sbjct 1442 AGCAATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGTTACCTGCACCTCCTGGCTGAATCG 1501 Query 33959 TTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTT 34018 || | || ||||||||||| || ||||| ||||| || || |||| || || || Sbjct 1502 CTCCACCAAGTTTTCATTCACAATGCCATCTGATGCTGCGAAGAATGCCAGCACGTGCTT 1561 Query 34019 TATAAA 34024 ||||| Sbjct 1562 GATAAA 1567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627006346160640