Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value SEQ22875 109 5e-19 SEQ78411 102 8e-17 >SEQ22875 Length=3501 Score = 109 bits (120), Expect = 5e-19 Identities = 276/415 (67%), Gaps = 6/415 (1%) Strand=Plus/Minus Query 21025 CCTTTGTACGGTTCGTTCCATGCGCTGACACCTTTCTGGGGTTTCTGTATGGCCGCCCAC 21084 || ||||| || || | ||| ||| |||| || ||||| | ||| || | || || || Sbjct 3501 CCCTTGTAGGGGTCATCCCAGGCGGTGACGCCCTTCTGCGCTTTTTGCAGCGCGGCGAAC 3442 Query 21085 GGATCGTGAATGGCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCG 21144 |||||||| |||| || || || || | |||||| ||| || || |||| ||| | | Sbjct 3441 GGATCGTGGATGGAGACTTTGAAATCCTCGCGGCCCTGGCAGGAGCGCTGCAGCGCCTGG 3382 Query 21145 AAACTGCCCGGGACACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACG 21204 || ||||| | ||| || ||||||||||| | ||| ||||| || || | Sbjct 3381 AAGCTGCCTTCAATCTCTTTCAGGCTGTCGTTGATGCCGTTGCCGCCGCAGATCGGGATA 3322 Query 21205 AAACCGTACAACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGC 21264 || ||||||| || || | || |||| | | || | || ||||||| || | |||| Sbjct 3321 AAGCCGTACAGCAGGTGAGTCAGGTTCTGCGCCGGGATCTTGTCGACGGTGAAATTGCGC 3262 Query 21265 GGATACACACCCCATTCGACAAAGTATGCTCCAATGATCTTGTCCGAGCGCTTTTCGAAA 21324 || || ||||| ||||| || || | || | | ||| | || || || | Sbjct 3261 CCGTAAACGCCCCACTCGACGAAATAAGAACCGACCACTTTGCCGGAATTCTGTTTATAC 3202 Query 21325 CGTTTATTGTTTTCGAGATAATCG--TAGACGAGCGGCGCGAGATGCGAGCCGTCCGTGT 21382 ||||||| ||||| || | || | | |||||| | ||| |||||| |||| Sbjct 3201 GGTTTATTCTTTTCCAG--CAGCGGCTCTTTCAACGGCGCCAAATGGCTGCCGTCGGTGT 3144 Query 21383 CGGCCACGACGACTTTAACCGGTG-CGCTAGTCGAACAGCCGTCGACGTTGCACA 21436 ||| ||| || | ||| | || | |||| | | ||||||||| | ||||||| Sbjct 3143 CGGACACCAC-AATTTCAGTGGCGTCGCTGGCGGTGCAGCCGTCGGCATTGCACA 3090 >SEQ78411 Length=2203 Score = 102 bits (112), Expect = 8e-17 Identities = 301/457 (66%), Gaps = 9/457 (2%) Strand=Plus/Plus Query 52588 TGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAA 52647 |||||| | |||| | | || |||||||| || ||||| || ||||| | || || Sbjct 1753 TGGATCCAGGACGAGGAGTCGACCTTTGCCGAGCGGCTGGTGGCCTTTGCCGTCGTCGAG 1812 Query 52648 GGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATG 52707 || | || || ||||| ||||| | || || | | || | |||| | ||| Sbjct 1813 GGCATCTTCTTCTCGGGGTCCTTTGCCTCCATCTTCTGGCTTAAGAAGCGGGGCCTGATG 1872 Query 52708 CCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTT 52767 ||||| || || || ||||||| |||| ||||||||||| ||||||||||| || ||| Sbjct 1873 CCCGGTCTGACCTTCTCCAACGAGCTGATCTCGCGCGACGAGGGAATGCACACGGACTTT 1932 Query 52768 GCGTG-TTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAG- 52825 || || | | || | ||| | | | | || | || | | || || Sbjct 1933 GCCTGCATCCTCTTCT----CGCACCTCCAGCACCGGCCCTCCAAGGAGATCA-TCGAGC 1987 Query 52826 ACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTAT 52885 || | | ||||| || | ||| || | | || || |||||| | | || || | Sbjct 1988 GGATCGTGACGGAGGCGGTGGCCATCGAGCAGGTGTACTTCACGGACTCGCTGCCGGTGT 2047 Query 52886 CATTGTTGGGCATGAAC-GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGA 52944 | || ||||||||||| || | | | |||||| ||||| | ||||| ||||||||| | Sbjct 2048 CGCTGCTGGGCATGAACTGCAAGC-TCATGTGCCAGTACGTGGAGTTCGTTGCGGACCGC 2106 Query 52945 CTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATG 53004 ||| || || |||||| | ||| ||| || | | | ||||| || |||||| Sbjct 2107 CTGCTGGTGGCGCTCGGGCTCAAGAAGATCTACAACGTGAGCAACCCGTTCGACTTTATG 2166 Query 53005 AACAACATATCGCTCGAGGGCAAAACAAACTTTTTCG 53041 | ||||| |||||| ||||| || ||||| |||| Sbjct 2167 GAGAACATCTCGCTCAGCGGCAAGACCAACTTCTTCG 2203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493849768729600