Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value SEQ78411 89.7 5e-13 seq271924 82.4 8e-11 >SEQ78411 Length=2203 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 50404 ACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGC 50463 || || ||||| || | ||||| |||||| | || || || | || || || || | Sbjct 1774 ACCTTTGCCGAGCGGCTGGTGGCCTTTGCCGTCGTCGAGGGCATCTTCTTCTCGGGGTCC 1833 Query 50464 TTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAAC 50523 ||||| |||| || | |||| | ||| | |||||||| || || || |||| Sbjct 1834 TTTGCCTCCATCTTCTGGCTTAAGAAGCGGGGCCTGATGCCCGGTCTGACCTTCTCCAAC 1893 Query 50524 GAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50567 ||| |||| ||||||||||| ||||||||||| |||||||| || Sbjct 1894 GAGCTGATCTCGCGCGACGAGGGAATGCACACGGACTTTGCCTG 1937 >seq271924 Length=17277 Score = 82.4 bits (90), Expect = 8e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 143054 ||||||| || |||||||| | || || ||||| | || || |||||| ||| Sbjct 10568 CTTTTTGGATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGA 10627 Query 143055 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 143114 | | || ||||||||||||||||| ||||| ||||| ||| ||| ||| | | || Sbjct 10628 TTAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTTGCTTTGACATTTT 10687 Query 143115 CCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 143174 | | || || | | ||||||||| | || | || || || |||| || || || | Sbjct 10688 CTATTGTATCTGATGCTTCTACTTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACAA 10747 Query 143175 ATATTTGCAT 143184 | |||||||| Sbjct 10748 AAATTTGCAT 10757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504751290524160