Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value SEQ40258 156 1e-33 seq207931 96.9 9e-16 seq246521 80.6 7e-11 >SEQ40258 Length=3107 Score = 156 bits (172), Expect = 1e-33 Identities = 244/347 (70%), Gaps = 4/347 (1%) Strand=Plus/Plus Query 25414 ATACCTTCCAGTATTACCCAGGGAATACTGTCATCAATATCCAGATCGCGGCGTTCAGTT 25473 || || || ||||| ||| || ||| |||||| | | | | ||| | ||| |||||| Sbjct 577 ATTCCCTCAAGTATCGGCCACGGCGTACCGTCATCGAGACCAAAATCCCTGCGCTCAGTT 636 Query 25474 GCCAGCATGGTCAGATCTGCATACTTCACTACGCTGGCTTCTTC--CAGTGGCAAGCCAA 25531 |||||||| |||| || || | ||| || | || | ||| | |||||| |||| Sbjct 637 GCCAGCATAATCAGGTCCGCTTTCTTAAC--CTCTCGACTCTGAGTCTGTGGCAGGCCAT 694 Query 25532 ACTTAAAGCGGATCAGTTGATCGGTACGTTTCTCAATCTCGCGATAATCAGGCAGTAACG 25591 || | |||| || | || ||||| ||||||||| || ||||| ||||| | | Sbjct 695 ACGTTTTCCGGACCATACGGTCTACACGTTCCTCAATCTCCCGGTAATCTGGCAGCAGTG 754 Query 25592 CTTTTAATGGGGCAGGGATATCCTGGCAATACGCTTCGGCTGCGTCGTGCATCAGGGCTT 25651 | || | || |||| | || | ||| |||||||| || || ||||| ||||||| Sbjct 755 CCTTGAGGGGTGCAGTAACGTCACCGATATAAGCTTCGGCGGCATCATGCATGAGGGCTT 814 Query 25652 CAAAGGCAAACTCCGGTGATACAAGCTGGCTGCACAGTACGGAATGCTGCGCCACGCTAT 25711 ||||||| || || || | ||||| | |||||| || ||||||||||| || ||||| | Sbjct 815 CAAAGGCGAATTCGGGCGCGACAAGTTCGCTGCAGAGAACGGAATGCTGTGCGACGCTGT 874 Query 25712 AAAATTCAGGGAGATGTCCGGAGAAGCGGCAAATATTGGAAAGCGCC 25758 |||| || | ||||| || | |||||||| | ||||| || ||| Sbjct 875 AAAAATCCCGCAGATGCCCTGCAAAGCGGCAGGTGTTGGAGAGTGCC 921 >seq207931 Length=1516 Score = 96.9 bits (106), Expect = 9e-16 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 22508 CTGCCAGATAGCTGAAACGTATTTCGCCTGATGCCTGGCATCAGCCAGCGCGTTGT-GCA 22566 ||||||||| || ||||||||||| |||||||| |||||||| | || ||| ||| || Sbjct 1151 CTGCCAGATTGCGGAAACGTATTTAGCCTGATGGATGGCATCATCGAGAGCGCTGTGGCG 1210 Query 22567 TATCGCCTTCGAACGGCATGTCACGTTTGGGATCGAAGCCGATTGCACGACCCAAAGTAA 22626 | | |||||| || ||||| ||||| || |||||||| ||||| || ||||| | Sbjct 1211 TGT-GCCTTCAAATGGCATATCACGCTTCGGATCGAACCCGATGGCTTTACCCATCTCGA 1269 Query 22627 CCATCGTGCGGACGTCATGATCGTTCC 22653 | | || || |||||| | || |||| Sbjct 1270 CGACGGTTCGCACGTCACGGTCATTCC 1296 >seq246521 Length=5096 Score = 80.6 bits (88), Expect = 7e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 21035 ATTGGGACGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTC 21094 ||||||||||||||||||||||||| | ||| ||| ||| ||||||||||||| | | Sbjct 179 ATTGGGACGGTCTCGAAAACCGTTGTGCGGGCAACCGTACCGTGGGTTCGAATCCCACCC 238 Query 21095 TCTCCGCCA 21103 ||||||||| Sbjct 239 TCTCCGCCA 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127810920042816