Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value SEQ97744 201 8e-47 seq216857 174 1e-38 seq342797 168 5e-37 seq282189 107 1e-18 >SEQ97744 Length=86731 Score = 201 bits (222), Expect = 8e-47 Identities = 198/256 (77%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 80302 TGACGCCAGTGTCGATGCAATTCTCACAGACCCGCCCTACGAACTGGGATTCATGGGCAA 80361 ||| ||||| || || || | |||| || || || || |||||||| |||||||| || Sbjct 15594 TGATGCCAGCGTGGACGCGGTCATCACTGATCCACCGTATGAACTGGGCTTCATGGGGAA 15535 Query 80362 GAAGTGGGACGGCTCGGGCATCGCCTTCGACGTCGAGATGTGGGAGCAATGCCTGCGGGT 80421 ||||| || | || ||||||||| |||| | | ||||| |||| || ||||| || Sbjct 15534 ACGTTGGGATGGAACCGGTATCGCCTTCAACGTTGCGGTGTGGCAGCAGTGTCTGCGTGT 15475 Query 80422 CCTCAAGCCCGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTGAC 80481 |||||| || || ||||||||||| |||||||| || || |||||||||||||||||| | Sbjct 15474 CCTCAAACCTGGCGGGCACCTGCTGGCCTTCGGTGGATCACGCACCTGGCACCGGCTGGC 15415 Query 80482 CGTGGCCATCGAGGACGCCGGGTTTGAGATCCGCGACTCGATCGCCTGGCTGTACGGCAG 80541 ||| || |||||||||||||| || ||| | ||||| ||||| ||||| ||| || Sbjct 15414 CGTCGCGATCGAGGACGCCGGATTCGAGCTACGCGATCATATCGCGTGGCTCTACAGCCA 15355 Query 80542 CGGGTTCCCGAAGTCG 80557 |||||||| || ||| Sbjct 15354 AGGGTTCCCAAAATCG 15339 Score = 95.1 bits (104), Expect = 9e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 80930 GGATGGGGCACAGCGCTGAAACCATCGTTTGAGCCCATCGTGGTCGCGCGCAAGCCTCTC 80989 || |||||||| ||||| ||||| | |||||||| | ||||| || || || || | Sbjct 14921 GGCTGGGGCACCGCGCTCAAACCCGCATTTGAGCCAGTGGTGGTGGCACGTAAACCGTTG 14862 Query 80990 GTGGGCACGGTGGCGGCGAATGTCCTGGAGCACGGTACGGGGGCGTTGAACATCGACGCC 81049 |||||| || ||||| || ||||||| |||| || |||||| || |||| |||||| Sbjct 14861 TCGGGCACCGTCGCGGCCAACGTCCTGGCCTACGGAACCGGGGCGCTGCACATTGACGCC 14802 Query 81050 TGCCGCATCGGC 81061 ||||| ||||| Sbjct 14801 TGCCGGGTCGGC 14790 >seq216857 Length=94037 Score = 174 bits (192), Expect = 1e-38 Identities = 143/174 (82%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 80411 TGCCTGCGGGTCCTCAAGCCCGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGG 80470 ||||| || ||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct 15307 TGCCTACGCGTCCTCAAGCCGGGTGGACACCTACTCGCGTTCGGCGGCTCGCGCACCTGG 15366 Query 80471 CACCGGCTGACCGTGGCCATCGAGGACGCCGGGTTTGAGATCCGCGACTCGATCGCCTGG 80530 || ||||| | | || |||||||| |||| || ||| |||||||| ||||||||| Sbjct 15367 CATCGGCTCGCGGCTGCGATCGAGGATTCCGGTTTCGAGCTCCGCGACAGCATCGCCTGG 15426 Query 80531 CTGTACGGCAGCGGGTTCCCGAAGTCGCTCGACGTGGCGAAGGCGATCGACAAG 80584 ||||||| ||||||||||||||| | |||||| | ||||||||||||||| Sbjct 15427 TTGTACGGGTCGGGGTTCCCGAAGTCGATGGACGTGTCCAAGGCGATCGACAAG 15480 >seq342797 Length=99442 Score = 168 bits (186), Expect = 5e-37 Identities = 217/297 (73%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 99208 ACCGCGGCCTCGATCTCCCCATCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGC 99267 ||| |||| |||||| | |||| || ||| || ||||| || || || | || || | Sbjct 65841 ACCACGGCGCTGATCTCTTCGTCGGTGATGAAGGCACCCTGCATGCGAATCG-GCCGCCC 65783 Query 99268 GCC-CCCACTGGCAGAAATAACCCGTCACCCATTCCCATGAGTTGCTCGGCTCCGCCCTC 99326 | | |||| ||||| || | ||||||||||| || ||||| | |||||| || | Sbjct 65782 GGCGCCCATCGGCAGGAACAGTCCGTCACCCATACCGATGAGCTTCTCGGCACCTGGTTG 65723 Query 99327 GTCCAGGATCACCCGGCTATCGGTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCAC 99386 ||||||||| || ||||| || || || || | || || || | || ||||| ||||| Sbjct 65722 GTCCAGGATGACGCGGCTGTCAGTCAGCGATGACGTCGCAAAGGCAAGGCGCGAAGGCAC 65663 Query 99387 GTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 99446 || ||||||| || || || ||||| ||||| || || ||||| || ||||| || || Sbjct 65662 ATTCGTCTTGATCAGACCGGTGACCACGTCCACCGACGGACGCTGGGTGGCCAGCACCAG 65603 Query 99447 ATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTC 99503 || ||||||||||| || |||||||| | |||||| || ||| | |||| || || Sbjct 65602 GTGGATGCCGGCCGCGCGTGCCTTCTGGGTGATGCGCACGATGGCGTCCTCGACGTC 65546 Score = 149 bits (164), Expect = 4e-31 Identities = 263/378 (70%), Gaps = 23/378 (6%) Strand=Plus/Minus Query 99691 AGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACAT-TTGGGGTCGATCATGATGAG 99749 ||||| || ||||| | ||| || || || || || ||| || |||||||||| ||| | Sbjct 65301 AGGTGCGGAATACCTTCGTAGGGTGTCAGTTCCAC-CATCTTCGGGTCGATCAGGATCAT 65243 Query 99750 TTTGACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCT 99809 ||||| || || || || ||| ||||| || || ||||| ||||||| |||||| Sbjct 65242 CCTGACCTCCTCCGGAGTGGCGCGGGCCAGCAGTGAGACGAGCATCGAGTTGACGAAGCT 65183 Query 99810 GGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTAGCCAGGTTCAG 99869 ||||| ||||| ||||| | || || |||||||| ||||||||||| |||||||| Sbjct 65182 CGACTTACCCGAACCGGTGGAACCGGCAACCAGCAGGTGCGGCATCTTGGCCAGGTTGGC 65123 Query 99870 GGAGATGTCCTTGCCCTCGACGTCCTTGCCCACTGCCACGGTCAA---CGGATGGT---- 99922 ||| ||| | |||||||| ||||||||||| || || |||| |||||||| Sbjct 65122 GGAAATGAAGTCGCCCTCGATGTCCTTGCCCA-GGC--CGATCAACAGCGGATGGTGATC 65066 Query 99923 CGT-----CTTCGGGAACGATGTGC------TGCAACCGCACAGTCTGCCGTTCCGGCCG 99971 ||| |||||| || | || || ||||| ||| ||| || | Sbjct 65065 CGTGCGGGTTTCGGGTGCGGTCAGCACATCGGCCAGTCGCACCATCTCCCGATCGGTATT 65006 Query 99972 GGGGAGCTCGATTCCTACGGCTGTTTTCCCGGGGATGGGGGCAACCACCCGGACGCTCTC 100031 || | |||||| || || || | || |||||||| || |||| || || ||||| || Sbjct 65005 CGGCACCTCGATGCCGACCGCCGACTTGCCGGGGATCGGCGCAAGCAGGCGCACGCTGTC 64946 Query 100032 TGTTGCGAGCGCGTAGGC 100049 || || | |||||| || Sbjct 64945 GGTGGCCACCGCGTACGC 64928 >seq282189 Length=1723 Score = 107 bits (118), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 99376 CGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTC 99435 |||| || | |||| |||||| ||||| || | ||||||||| || || ||||| ||| Sbjct 941 CGCGTCGGGATGTTGGCCTTGATCAGGCCGGTGATCACATCCACCGACGGACGCTGGGTC 1000 Query 99436 GCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCC 99495 ||||| || || || ||||| ||||||||||| || ||||| | ||| | || | Sbjct 1001 GCCAGCACCAGGTGGATGCCCGCCGCACGCGCTTTTTGCGCCAGACGGGCGATCAGCTCT 1060 Query 99496 TCAACCTCTTTCTTGTAGCCACCCATCATGAGATCAGCGAGTTCATCCACCACTACCACG 99555 || ||| |||||| | | ||| || ||||| |||| ||| || |||| |||||| Sbjct 1061 TCGACC---TTCTTGCCGACCGTCATGATCAGATCGGCGAATTCGTCGACCATCACCACG 1117 Query 99556 ATGTAGGG 99563 ||||| || Sbjct 1118 ATGTACGG 1125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353099789247168