Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_004827.1 Length=43033 Score E Sequences producing significant alignments: (Bits) Value seq233602 138 3e-28 >seq233602 Length=4279 Score = 138 bits (152), Expect = 3e-28 Identities = 223/316 (71%), Gaps = 10/316 (3%) Strand=Plus/Plus Query 13401 CGCAGCGAATGCCGCCGAATTAAACGTGAGCGAGGAGATATTGGATTTATTGGTATTGAC 13460 ||||| || ||||| | ||||| |||||||| ||| | || | ||| ||||| Sbjct 614 CGCAGAGA--GCCGCAGGATTAAGCGTGAGCGCGGAAGCGTAGGGATGATTCTCGTTGAC 671 Query 13461 TACTTAACGCTGATGAAAGCCGAAAAAGCCGAGCGTAACGACTTAGCTTACGGGCAAG-T 13519 ||| | ||||||||||||||||| || || ||||||||||| | || ||| |||| | | Sbjct 672 TACCTGACGCTGATGAAAGCCGAGAAGGCAGAGCGTAACGATCTGGCATAC-GGCATGAT 730 Query 13520 TACCAAAGAATTAAAAAATCTTGCGCGTGAAATGGATTG---TGTGGTTTTGCTTTTAAC 13576 ||||||| |||| || || || || || | || ||| ||| ||||| || Sbjct 731 CACCAAAGGGCTAAAGAACCTCGCTAAAGAGCTGAACTGCGTTGTCGTTCTGCTT---AC 787 Query 13577 TCAACTGAATCGTGGGCTTGAAAGTCGCTCAGATAAACGACCAATGCCAAGTGACAGCCG 13636 || || || || | ||||| | || | | ||||| || ||||||||||| ||| Sbjct 788 CCAGCTTAACCGCGACCTTGAGAAGCGAACCAACAAACGCCCGCTGCCAAGTGACTCCCG 847 Query 13637 TGATACAGGACAAATTGAACAAGAGTGTGATTACTGGTTGGGACTTTATAAAGAATCCGT 13696 ||||| || ||||| || || || || ||||||||| ||||| ||||| ||| | Sbjct 848 CGATACCGGGCAAATCGAGCAGGATTGCGATTACTGGCTGGGAATTTATCGAGAGGGAGC 907 Query 13697 TTACAACGAAAACGCC 13712 |||| |||| |||||| Sbjct 908 TTACGACGAGAACGCC 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137000586054720