Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_004913.3 Length=59866 Score E Sequences producing significant alignments: (Bits) Value seq233602 284 5e-72 seq194631 244 4e-60 SEQ87507 141 4e-29 >seq233602 Length=4279 Score = 284 bits (314), Expect = 5e-72 Identities = 267/340 (79%), Gaps = 0/340 (0%) Strand=Plus/Plus Query 46189 CTTTACATCGACGACACGCCGGGATTATCTCTGGCTCAAATCGTCAGCGAAAGCCGTCGA 46248 || |||||||| ||||| || || ||||||||||||| |||||| || ||||| | Sbjct 570 CTCTACATCGATGACACCCCAGGGCTATCTCTGGCTCATATCGTCGCAGAGAGCCGCAGG 629 Query 46249 ATCAAACGAGAAAAAGGATGCGTTGGCATGATTCTGGTCGATTACCTGACACTAATGACC 46308 || || || || ||| |||| || |||||||| || || |||||||| || |||| Sbjct 630 ATTAAGCGTGAGCGCGGAAGCGTAGGGATGATTCTCGTTGACTACCTGACGCTGATGAAA 689 Query 46309 GCTGAGAAGGCCGATCGCAACGACCTTGCTTACGGCATGATCACCAAAGGACTGAAGAAC 46368 || |||||||| || || ||||| || || |||||||||||||||||||| || |||||| Sbjct 690 GCCGAGAAGGCAGAGCGTAACGATCTGGCATACGGCATGATCACCAAAGGGCTAAAGAAC 749 Query 46369 CTTGCCAAAGAGCTTGATTGCGTTGTTGTGCTTCTGACGCAGCTTAACCGCGCACTGGAA 46428 || || |||||||| | |||||||| || || || || ||||||||||||| || || Sbjct 750 CTCGCTAAAGAGCTGAACTGCGTTGTCGTTCTGCTTACCCAGCTTAACCGCGACCTTGAG 809 Query 46429 AGCCGAACCAATAAACGCCCACTACCAAGTGACTCACGAGATACAGGGCAGATTGAACAG 46488 | |||||||| |||||||| || ||||||||||| || ||||| ||||| || || ||| Sbjct 810 AAGCGAACCAACAAACGCCCGCTGCCAAGTGACTCCCGCGATACCGGGCAAATCGAGCAG 869 Query 46489 GATTGCGATTATTGGGTGGGGATCCATCGTGAAGGTGCTT 46528 ||||||||||| ||| |||| || |||| || || |||| Sbjct 870 GATTGCGATTACTGGCTGGGAATTTATCGAGAGGGAGCTT 909 Score = 107 bits (118), Expect = 7e-19 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 45850 ACAGGGATCCCATCGCTGGACAGGATGCTGTCACCGAAAGGTCTGGTGAAAGGCTCTCTG 45909 |||||||| ||||||||||| |||| | ||||||||| ||||||| || || | Sbjct 261 ACAGGGATTCCATCGCTGGATGAATTGCTCGCTCCGAAAGGTTTGGTGAATGGATCGTTA 320 Query 45910 TTTGTCATTGGCGCTCGCCCTAAGATGGGGAAAACGACGCTATACAGCCAGATGGCAATC 45969 || || | ||||| || || |||||||| || || ||||| |||| | ||||| | Sbjct 321 TTCGTTGTCGGCGCGCGGCCAAAGATGGGCAAGACCACGCTTTACATGAAAATGGCCTTG 380 Query 45970 AATTGCGCAGTGCATGAGAAAAAGCCCGCTCTGATGTTCAGCCTTGAAATGCCA 46023 |||||||| || | ||||| ||||| || | || ||||||||||||||| Sbjct 381 CATTGCGCACTGGAAGAGAACAAGCCGGCAATCGCCTTTAGCCTTGAAATGCCA 434 >seq194631 Length=1002 Score = 244 bits (270), Expect = 4e-60 Identities = 273/365 (75%), Gaps = 0/365 (0%) Strand=Plus/Minus Query 44916 GAGAGTGCCACAGCAGACAAAAAGTCTGACAAGAAAAAACCTTCCGTTAGCTGTCAGGAT 44975 |||||||| |||| | |||| || || ||| |||||||| | | ||||| || Sbjct 367 GAGAGTGCATCAGCCAGCGAAAAATCAGAAAAGCAAAAACCTGCAATCTCATGTCAAGAC 308 Query 44976 GTTGTCGATGCTTACCACGAAATCCTTCCTGAAGCGCCAAAAATCCGCGCACTGAATGAC 45035 || |||| || || ||||||||||| || |||||| | || | ||||| | || Sbjct 307 GTCATCGACGCCTATCACGAAATCCTGCCAGAAGCGAAATCGGTCAGAGCACTAACCGAG 248 Query 45036 AAGCGTAAAAACCAGATCCGAACGTTCTGGCGCAAAGCCGGAGTGATAACCCGCCAGCTT 45095 |||||| | | ||| ||| |||||||| |||||||| ||| | || || ||||| Sbjct 247 AAGCGTCGCAGCTCGATTAAAACCTTCTGGCGAAAAGCCGGGGTGGTTACTCGTCAGCTG 188 Query 45096 GACGGGCATGGGTTCACGATGCAGGACTGGAGAAATTATTTGAGCTACGTAGGCGAAAAT 45155 || || ||||||||||||||| | |||||| | || ||| || ||||||| | || || Sbjct 187 GATGGTCATGGGTTCACGATGGAAGACTGGCGGAAATATCTGGGCTACGTTCGTGACAAC 128 Query 45156 TGCCGATGGATGTTCGAAGAGCGCCCAAACCATCAGCGCGGAACCGTCTGGCACAAAAAG 45215 ||||| ||||||||||||||||| | |||| |||||||| || || |||||||| ||| Sbjct 127 TGCCGCTGGATGTTCGAAGAGCGTCAGAACCTGCAGCGCGGGACTGTTTGGCACAAGAAG 68 Query 45216 GGATTTGATTTCCTGCTTAACGATAATACCTACCTGAAAGTTCGTGAGGGTGAACACGAT 45275 ||||| || |||||||| ||||| ||| || || |||||||||||||| || || || Sbjct 67 GGATTCGACTTCCTGCTGAACGACAATGTTTATCTCAAAGTTCGTGAGGGCGATCATGAC 8 Query 45276 GACCG 45280 ||||| Sbjct 7 GACCG 3 >SEQ87507 Length=1945 Score = 141 bits (156), Expect = 4e-29 Identities = 189/262 (72%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 57924 AATTATTGTGAGCAATACACCCGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAA 57983 ||| ||| ||||||||| || || ||||| |||||| || ||||| || || | ||| Sbjct 1290 AATGATTATGAGCAATATACGCGAGCTTCACGCGGAGCGTAGATGCCAAAGGTCACAAAT 1231 Query 57984 CCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGTGCCG 58043 || ||||| ||||| ||||| |||||||| |||||| ||||| || || | || Sbjct 1230 CCAAGCAACCCATTAACGAAGGTTTGCTGTACTTCTGTACGGACAACTTTGTCAGCTCCA 1171 Query 58044 CCACAAATTTTGGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGA 58103 ||||||| ||| ||||| | |||||||||||| ||||| || | || ||||| || Sbjct 1170 CCACAAACAGCGGCAGCATCAATAGTTTTCTTCTGACCAATACCGGCCACAAAGAAGTGG 1111 Query 58104 TGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAACGTCTGT 58163 || || || | | ||||||| ||| ||| | || ||| ||| |||| || || Sbjct 1110 TGAGTAGTGATCTGTTTTGGTGTTACCGCTACGTCATTTTTT---ACAATAAATGTTTGC 1054 Query 58164 TGAGCACATCCTGTAATAAGCA 58185 |||||||| || |||| || || Sbjct 1053 TGAGCACAGCCAGTAACAACCA 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190637773287168