Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq271924 147 5e-30 seq337017 143 6e-29 seq126025 87.8 4e-12 >seq271924 Length=17277 Score = 147 bits (162), Expect = 5e-30 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| || ||||| || || || || ||||| || ||||| | || || |||||||| | Sbjct 10568 CTTTTTGGATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGA 10627 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 ||| | ||| ||||| |||||||| ||||| || || |||||||||||||| ||||||| Sbjct 10628 TTAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTTGCTTTGACATTTT 10687 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| ||||| | |||||| |||| ||| || || || || || || || || |||| Sbjct 10688 CTATTGTATCTGATGCTTCTACTTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACAA 10747 Query 104550 ATATCTGCATTTTGTGTAC 104568 | || ||||| ||||| || Sbjct 10748 AAATTTGCATCTTGTGAAC 10766 >seq337017 Length=19082 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || ||||| || | ||| | ||| || || || || || ||||| || | Sbjct 18020 CTTTCTGTATGTTGTAGTCTGACAAAGTGCGACCATCCTCCAGCTGCTTCCCAGCGAAGA 18079 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | ||| || ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct 18080 TAAGTCGCTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGTATCTTGGCTTTTACATTCT 18139 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| || || || || ||||| || || || ||||||||||| | ||| || |||| Sbjct 18140 CTATAGTGTCTGAAGCCTCCACCTCAAGGGTGATTGTCTTACCAGTTAATGTCTTAACAA 18199 Query 104550 ATATCTGCATTTTG 104563 |||||||||||||| Sbjct 18200 ATATCTGCATTTTG 18213 >seq126025 Length=21299 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 ||||||||||| || ||||| |||||||||||||| | || || || || ||||| Sbjct 8979 CCTTCTTTATCTTGTATCTTGGCTTTTACATTTTCAATAGTGTCTGAAGCCTCCACCTCA 9038 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || ||||| || || || || || |||||||||||||| ||| Sbjct 9039 AGGGTGATGGTCTTCCCCGTTAGGGTCTTCACAAATATCTGCATGTTG 9086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146130533554304